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Items: 1 to 20 of 180

1.

Escherichia coli tmRNA lacking pseudoknot 1 tags truncated proteins in vivo and in vitro.

Wower IK, Zwieb C, Wower J.

RNA. 2009 Jan;15(1):128-37. doi: 10.1261/rna.1192409. Epub 2008 Nov 10.

2.

Requirements for resuming translation in chimeric transfer-messenger RNAs of Escherichia coli and Mycobacterium tuberculosis.

Wower IK, Zwieb C, Wower J.

BMC Mol Biol. 2014 Sep 15;15:19. doi: 10.1186/1471-2199-15-19.

3.

Contributions of pseudoknots and protein SmpB to the structure and function of tmRNA in trans-translation.

Wower IK, Zwieb C, Wower J.

J Biol Chem. 2004 Dec 24;279(52):54202-9. Epub 2004 Oct 19.

4.

Three of four pseudoknots in tmRNA are interchangeable and are substitutable with single-stranded RNAs.

Nameki N, Tadaki T, Himeno H, Muto A.

FEBS Lett. 2000 Mar 31;470(3):345-9.

5.

Transfer-messenger RNA unfolds as it transits the ribosome.

Wower IK, Zwieb C, Wower J.

RNA. 2005 May;11(5):668-73. Epub 2005 Apr 5.

6.

Functional and structural analysis of a pseudoknot upstream of the tag-encoded sequence in E. coli tmRNA.

Nameki N, Felden B, Atkins JF, Gesteland RF, Himeno H, Muto A.

J Mol Biol. 1999 Feb 26;286(3):733-44.

PMID:
10024447
7.

The role of SmpB and the ribosomal decoding center in licensing tmRNA entry into stalled ribosomes.

Miller MR, Liu Z, Cazier DJ, Gebhard GM, Herron SR, Zaher HS, Green R, Buskirk AR.

RNA. 2011 Sep;17(9):1727-36. doi: 10.1261/rna.2821711. Epub 2011 Jul 27.

8.

tmRNA regulates synthesis of the ArfA ribosome rescue factor.

Garza-Sánchez F, Schaub RE, Janssen BD, Hayes CS.

Mol Microbiol. 2011 Jun;80(5):1204-19. doi: 10.1111/j.1365-2958.2011.07638.x. Epub 2011 Mar 30.

9.

Simultaneous and functional binding of SmpB and EF-Tu-TP to the alanyl acceptor arm of tmRNA.

Barends S, Karzai AW, Sauer RT, Wower J, Kraal B.

J Mol Biol. 2001 Nov 16;314(1):9-21.

PMID:
11724528
10.

Genetic analysis of the structure and function of transfer messenger RNA pseudoknot 1.

Tanner DR, Dewey JD, Miller MR, Buskirk AR.

J Biol Chem. 2006 Apr 14;281(15):10561-6. Epub 2006 Feb 15.

11.

One SmpB molecule accompanies tmRNA during its passage through the ribosomes.

Bugaeva EY, Shpanchenko OV, Felden B, Isaksson LA, Dontsova OA.

FEBS Lett. 2008 Apr 30;582(10):1532-6. doi: 10.1016/j.febslet.2008.03.049. Epub 2008 Apr 7.

12.

SmpB contributes to reading frame selection in the translation of transfer-messenger RNA.

Watts T, Cazier D, Healey D, Buskirk A.

J Mol Biol. 2009 Aug 14;391(2):275-81. doi: 10.1016/j.jmb.2009.06.037. Epub 2009 Jun 21.

13.

SmpB: a protein that binds to double-stranded segments in tmRNA and tRNA.

Wower J, Zwieb CW, Hoffman DW, Wower IK.

Biochemistry. 2002 Jul 16;41(28):8826-36.

PMID:
12102625
14.

Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB.

Gutmann S, Haebel PW, Metzinger L, Sutter M, Felden B, Ban N.

Nature. 2003 Aug 7;424(6949):699-703.

PMID:
12904796
15.

Dial tm for rescue: tmRNA engages ribosomes stalled on defective mRNAs.

Haebel PW, Gutmann S, Ban N.

Curr Opin Struct Biol. 2004 Feb;14(1):58-65. Review.

PMID:
15102450
16.

The complex of tmRNA-SmpB and EF-G on translocating ribosomes.

Ramrath DJ, Yamamoto H, Rother K, Wittek D, Pech M, Mielke T, Loerke J, Scheerer P, Ivanov P, Teraoka Y, Shpanchenko O, Nierhaus KH, Spahn CM.

Nature. 2012 May 6;485(7399):526-9. doi: 10.1038/nature11006.

PMID:
22622583
17.

Structure probing of tmRNA in distinct stages of trans-translation.

Ivanova N, Lindell M, Pavlov M, Holmberg Schiavone L, Wagner EG, Ehrenberg M.

RNA. 2007 May;13(5):713-22. Epub 2007 Mar 30.

18.

Importance of the conserved nucleotides around the tRNA-like structure of Escherichia coli transfer-messenger RNA for protein tagging.

Hanawa-Suetsugu K, Bordeau V, Himeno H, Muto A, Felden B.

Nucleic Acids Res. 2001 Nov 15;29(22):4663-73.

19.

Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.

Neubauer C, Gillet R, Kelley AC, Ramakrishnan V.

Science. 2012 Mar 16;335(6074):1366-9. doi: 10.1126/science.1217039.

20.

Trans-translation by tmRNA and SmpB.

Une M, Kurita D, Muto A, Himeno H.

Nucleic Acids Symp Ser (Oxf). 2009;(53):305-6. doi: 10.1093/nass/nrp153.

PMID:
19749382

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