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Items: 1 to 20 of 236

1.

Data federation in the Biomedical Informatics Research Network: tools for semantic annotation and query of distributed multiscale brain data.

Bug W, Astahkov V, Boline J, Fennema-Notestine C, Grethe JS, Gupta A, Kennedy DN, Rubin DL, Sanders B, Turner JA, Martone ME.

AMIA Annu Symp Proc. 2008 Nov 6:1220.

PMID:
18999211
2.

Semantic web for integrated network analysis in biomedicine.

Chen H, Ding L, Wu Z, Yu T, Dhanapalan L, Chen JY.

Brief Bioinform. 2009 Mar;10(2):177-92. doi: 10.1093/bib/bbp002.

PMID:
19304873
3.

AlzPharm: integration of neurodegeneration data using RDF.

Lam HY, Marenco L, Clark T, Gao Y, Kinoshita J, Shepherd G, Miller P, Wu E, Wong GT, Liu N, Crasto C, Morse T, Stephens S, Cheung KH.

BMC Bioinformatics. 2007 May 9;8 Suppl 3:S4.

4.

A Semantic Web management model for integrative biomedical informatics.

Deus HF, Stanislaus R, Veiga DF, Behrens C, Wistuba II, Minna JD, Garner HR, Swisher SG, Roth JA, Correa AM, Broom B, Coombes K, Chang A, Vogel LH, Almeida JS.

PLoS One. 2008 Aug 13;3(8):e2946. doi: 10.1371/journal.pone.0002946.

5.

Interoperability driven integration of biomedical data sources.

Teodoro D, Choquet R, Schober D, Mels G, Pasche E, Ruch P, Lovis C.

Stud Health Technol Inform. 2011;169:185-9.

PMID:
21893739
6.

A national human neuroimaging collaboratory enabled by the Biomedical Informatics Research Network (BIRN).

Keator DB, Grethe JS, Marcus D, Ozyurt B, Gadde S, Murphy S, Pieper S, Greve D, Notestine R, Bockholt HJ, Papadopoulos P; BIRN Function; BIRN Morphometry; BIRN-Coordinating.

IEEE Trans Inf Technol Biomed. 2008 Mar;12(2):162-72. doi: 10.1109/TITB.2008.917893.

8.

Advancing translational research with the Semantic Web.

Ruttenberg A, Clark T, Bug W, Samwald M, Bodenreider O, Chen H, Doherty D, Forsberg K, Gao Y, Kashyap V, Kinoshita J, Luciano J, Marshall MS, Ogbuji C, Rees J, Stephens S, Wong GT, Wu E, Zaccagnini D, Hongsermeier T, Neumann E, Herman I, Cheung KH.

BMC Bioinformatics. 2007 May 9;8 Suppl 3:S2. Review.

9.

LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics.

Smith AK, Cheung KH, Yip KY, Schultz M, Gerstein MK.

BMC Bioinformatics. 2007 May 9;8 Suppl 3:S5. Review.

10.

Scaling the walls of discovery: using semantic metadata for integrative problem solving.

Manning M, Aggarwal A, Gao K, Tucker-Kellogg G.

Brief Bioinform. 2009 Mar;10(2):164-76. doi: 10.1093/bib/bbp007.

PMID:
19304872
11.

Towards Semantic e-Science for Traditional Chinese Medicine.

Chen H, Mao Y, Zheng X, Cui M, Feng Y, Deng S, Yin A, Zhou C, Tang J, Jiang X, Wu Z.

BMC Bioinformatics. 2007 May 9;8 Suppl 3:S6. Review.

12.

NeuroLOG: sharing neuroimaging data using an ontology-based federated approach.

Gibaud B, Kassel G, Dojat M, Batrancourt B, Michel F, Gaignard A, Montagnat J.

AMIA Annu Symp Proc. 2011;2011:472-80. Epub 2011 Oct 22.

13.

Information retrieval and knowledge discovery utilising a biomedical Semantic Web.

Mukherjea S.

Brief Bioinform. 2005 Sep;6(3):252-62. Review.

PMID:
16212773
14.

User-centered semantic harmonization: a case study.

Weng C, Gennari JH, Fridsma DB.

J Biomed Inform. 2007 Jun;40(3):353-64. Epub 2007 Mar 21.

15.

A journey to Semantic Web query federation in the life sciences.

Cheung KH, Frost HR, Marshall MS, Prud'hommeaux E, Samwald M, Zhao J, Paschke A.

BMC Bioinformatics. 2009 Oct 1;10 Suppl 10:S10. doi: 10.1186/1471-2105-10-S10-S10.

16.

Mediator infrastructure for information integration and semantic data integration environment for biomedical research.

Grethe JS, Ross E, Little D, Sanders B, Gupta A, Astakhov V.

Methods Mol Biol. 2009;569:33-53. doi: 10.1007/978-1-59745-524-4_3.

PMID:
19623485
17.

A service-oriented distributed semantic mediator: integrating multiscale biomedical information.

Mora O, Engelbrecht G, Bisbal J.

IEEE Trans Inf Technol Biomed. 2012 Nov;16(6):1296-303. doi: 10.1109/TITB.2012.2215045. Epub 2012 Aug 23.

PMID:
22929464
18.

Semantic search among heterogeneous biological databases based on gene ontology.

Cao SL, Qin L, He WZ, Zhong Y, Zhu YY, Li YX.

Acta Biochim Biophys Sin (Shanghai). 2004 May;36(5):365-70.

PMID:
15156279
19.

yOWL: an ontology-driven knowledge base for yeast biologists.

Villanueva-Rosales N, Dumontier M.

J Biomed Inform. 2008 Oct;41(5):779-89. doi: 10.1016/j.jbi.2008.05.001. Epub 2008 May 11.

20.

A model-driven approach for biomedical data integration.

Carlson D, Farkash A, Timm JT.

Stud Health Technol Inform. 2010;160(Pt 2):1164-8.

PMID:
20841867

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