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Items: 1 to 20 of 104

1.

A synthon approach to artificial chemistry.

Lenaerts T, Bersini H.

Artif Life. 2009 Winter;15(1):89-103. doi: 10.1162/artl.2009.15.1.15106.

PMID:
18855566
3.

A stochastic analysis of first-order reaction networks.

Gadgil C, Lee CH, Othmer HG.

Bull Math Biol. 2005 Sep;67(5):901-46. Epub 2005 Jan 19.

PMID:
15998488
4.

Artificial chemistries--a review.

Dittrich P, Ziegler J, Banzhaf W.

Artif Life. 2001 Summer;7(3):225-75. Review.

PMID:
11712956
5.

Computing weakly reversible linearly conjugate chemical reaction networks with minimal deficiency.

Johnston MD, Siegel D, Szederkényi G.

Math Biosci. 2013 Jan;241(1):88-98. doi: 10.1016/j.mbs.2012.09.008. Epub 2012 Oct 16.

PMID:
23079395
6.

MAPOS: a computer program for organic synthesis design based on synthon model of organic chemistry.

Matyska L, Koca J.

J Chem Inf Comput Sci. 1991 Aug;31(3):380-6.

PMID:
1939395
7.

Determination of complex reaction mechanisms. Analysis of chemical, biological and genetic networks.

Ross J.

J Phys Chem A. 2008 Mar 20;112(11):2134-43. doi: 10.1021/jp711313e. Epub 2008 Feb 15. Review.

PMID:
18275175
8.

Intramolecular dissociative electron transfer.

Antonello S, Maran F.

Chem Soc Rev. 2005 May;34(5):418-28. Epub 2005 Feb 17. Review.

PMID:
15852154
9.

Prediction of pairwise gene interaction using threshold logic.

Gowda T, Vrudhula S, Kim S.

Ann N Y Acad Sci. 2009 Mar;1158:276-86. doi: 10.1111/j.1749-6632.2008.03763.x.

PMID:
19348649
10.

Multistate vibronic interactions in difluorobenzene radical cations. I. Electronic structure calculations.

Faraji S, Köppel H.

J Chem Phys. 2008 Aug 21;129(7):074310. doi: 10.1063/1.2958915.

PMID:
19044770
11.

Nested uncertainties in biochemical models.

Schaber J, Liebermeister W, Klipp E.

IET Syst Biol. 2009 Jan;3(1):1-9. doi: 10.1049/iet-syb:20070042.

PMID:
19154080
12.

Methods of information geometry in computational system biology (consistency between chemical and biological evolution).

Astakhov V.

Methods Mol Biol. 2009;569:115-27. doi: 10.1007/978-1-59745-524-4_6.

PMID:
19623488
13.

Dynamic control and information processing in the Belousov-Zhabotinsky reaction using a coevolutionary algorithm.

Toth R, Stone C, Adamatzky A, de Lacy Costello B, Bull L.

J Chem Phys. 2008 Nov 14;129(18):184708. doi: 10.1063/1.2932252.

PMID:
19045424
14.

Mechanism and model of the oscillatory electro-oxidation of methanol.

Sauerbrei S, Nascimento MA, Eiswirth M, Varela H.

J Chem Phys. 2010 Apr 21;132(15):154901. doi: 10.1063/1.3368790.

PMID:
20423195
15.

Swarm chemistry.

Sayama H.

Artif Life. 2009 Winter;15(1):105-14. doi: 10.1162/artl.2009.15.1.15107.

PMID:
18855565
16.

Exploring multiplicity conditions in enzymatic reaction networks.

Otero-Muras I, Banga JR, Alonso AA.

Biotechnol Prog. 2009 May-Jun;25(3):619-31. doi: 10.1002/btpr.112.

PMID:
19496142
17.

Liquid state theory of polyelectrolyte solutions.

Yethiraj A.

J Phys Chem B. 2009 Feb 12;113(6):1539-51. doi: 10.1021/jp8069964. Review.

PMID:
19035818
18.

Ontology aided modeling of organic reaction mechanisms with flexible and fragment based XML markup procedures.

Sankar P, Aghila G.

J Chem Inf Model. 2007 Sep-Oct;47(5):1747-62. Epub 2007 Aug 18.

PMID:
17705463
19.

Chemical reaction network approaches to Biochemical Systems Theory.

Arceo CP, Jose EC, Marin-Sanguino A, Mendoza ER.

Math Biosci. 2015 Nov;269:135-52. doi: 10.1016/j.mbs.2015.08.022. Epub 2015 Sep 10.

PMID:
26363083
20.

Emergence of scale-free distribution in protein-protein interaction networks based on random selection of interacting domain pairs.

Nacher JC, Hayashida M, Akutsu T.

Biosystems. 2009 Feb;95(2):155-9. doi: 10.1016/j.biosystems.2008.10.002. Epub 2008 Nov 1.

PMID:
19010382

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