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Items: 1 to 20 of 105


Diverse splicing patterns of exonized Alu elements in human tissues.

Lin L, Shen S, Tye A, Cai JJ, Jiang P, Davidson BL, Xing Y.

PLoS Genet. 2008 Oct 17;4(10):e1000225. doi: 10.1371/journal.pgen.1000225.


Gain of a New Exon by a Lineage-Specific Alu Element-Integration Event in the BCS1L Gene during Primate Evolution.

Park SJ, Kim YH, Lee SR, Choe SH, Kim MJ, Kim SU, Kim JS, Sim BW, Song BS, Jeong KJ, Jin YB, Lee Y, Park YH, Park YI, Huh JW, Chang KT.

Mol Cells. 2015 Nov;38(11):950-8. doi: 10.14348/molcells.2015.0121. Epub 2015 Nov 4.


Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes.

Lin L, Jiang P, Shen S, Sato S, Davidson BL, Xing Y.

Hum Mol Genet. 2009 Jun 15;18(12):2204-14. doi: 10.1093/hmg/ddp152. Epub 2009 Mar 26.


The contribution of Alu exons to the human proteome.

Lin L, Jiang P, Park JW, Wang J, Lu ZX, Lam MP, Ping P, Xing Y.

Genome Biol. 2016 Jan 28;17:15. doi: 10.1186/s13059-016-0876-5.


Alu-SINE exonization: en route to protein-coding function.

Krull M, Brosius J, Schmitz J.

Mol Biol Evol. 2005 Aug;22(8):1702-11. Epub 2005 May 18.


Alu-containing exons are alternatively spliced.

Sorek R, Ast G, Graur D.

Genome Res. 2002 Jul;12(7):1060-7.


Widespread establishment and regulatory impact of Alu exons in human genes.

Shen S, Lin L, Cai JJ, Jiang P, Kenkel EJ, Stroik MR, Sato S, Davidson BL, Xing Y.

Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):2837-42. doi: 10.1073/pnas.1012834108. Epub 2011 Jan 31.


The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons.

Lev-Maor G, Sorek R, Shomron N, Ast G.

Science. 2003 May 23;300(5623):1288-91.


Multifactorial interplay controls the splicing profile of Alu-derived exons.

Ram O, Schwartz S, Ast G.

Mol Cell Biol. 2008 May;28(10):3513-25. doi: 10.1128/MCB.02279-07. Epub 2008 Mar 10.


Alternative splicing of Alu exons--two arms are better than one.

Gal-Mark N, Schwartz S, Ast G.

Nucleic Acids Res. 2008 Apr;36(6):2012-23. doi: 10.1093/nar/gkn024. Epub 2008 Feb 14.


Intronic Alus influence alternative splicing.

Lev-Maor G, Ram O, Kim E, Sela N, Goren A, Levanon EY, Ast G.

PLoS Genet. 2008 Sep 26;4(9):e1000204. doi: 10.1371/journal.pgen.1000204.


Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene.

Amit M, Sela N, Keren H, Melamed Z, Muler I, Shomron N, Izraeli S, Ast G.

BMC Mol Biol. 2007 Nov 29;8:109.


Beyond DNA: RNA editing and steps toward Alu exonization in primates.

Möller-Krull M, Zemann A, Roos C, Brosius J, Schmitz J.

J Mol Biol. 2008 Oct 10;382(3):601-9. doi: 10.1016/j.jmb.2008.07.014. Epub 2008 Jul 16.


Alternative splicing of human height-related zinc finger and BTB domain-containing 38 gene through Alu exonization.

Hong KW, Shin YB, Jin HS, Lim JE, Choi JY, Chang KT, Kim HS, Oh B.

Biochem Genet. 2011 Jun;49(5-6):283-91. doi: 10.1007/s10528-010-9406-4. Epub 2010 Dec 29.


Transposable elements in disease-associated cryptic exons.

Vorechovsky I.

Hum Genet. 2010 Feb;127(2):135-54. doi: 10.1007/s00439-009-0752-4. Epub 2009 Oct 10.


Alu exonization events reveal features required for precise recognition of exons by the splicing machinery.

Schwartz S, Gal-Mark N, Kfir N, Oren R, Kim E, Ast G.

PLoS Comput Biol. 2009 Mar;5(3):e1000300. doi: 10.1371/journal.pcbi.1000300. Epub 2009 Mar 6.


Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons.

Sorek R, Lev-Maor G, Reznik M, Dagan T, Belinky F, Graur D, Ast G.

Mol Cell. 2004 Apr 23;14(2):221-31.


Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends.

Tajnik M, Vigilante A, Braun S, Hänel H, Luscombe NM, Ule J, Zarnack K, König J.

Nucleic Acids Res. 2015 Dec 2;43(21):10492-505. doi: 10.1093/nar/gkv956. Epub 2015 Sep 22.


Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs).

Krull M, Petrusma M, Makalowski W, Brosius J, Schmitz J.

Genome Res. 2007 Aug;17(8):1139-45. Epub 2007 Jul 10.

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