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Items: 1 to 20 of 75

1.

Distribution and dynamics of adamantanes in a lipid bilayer.

Chew CF, Guy A, Biggin PC.

Biophys J. 2008 Dec 15;95(12):5627-36. doi: 10.1529/biophysj.108.139477. Epub 2008 Oct 3.

2.

Free energetics and the role of water in the permeation of methyl guanidinium across the bilayer-water interface: insights from molecular dynamics simulations using charge equilibration potentials.

Ou S, Lucas TR, Zhong Y, Bauer BA, Hu Y, Patel S.

J Phys Chem B. 2013 Apr 4;117(13):3578-92. doi: 10.1021/jp400389z. Epub 2013 Mar 26.

PMID:
23409975
3.

Protein-fluctuation-induced water-pore formation in ion channel voltage-sensor translocation across a lipid bilayer membrane.

Rajapaksha SP, Pal N, Zheng D, Lu HP.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015;92(5):052719. doi: 10.1103/PhysRevE.92.052719. Epub 2015 Nov 30.

PMID:
26651735
4.

The importance of membrane defects-lessons from simulations.

Bennett WF, Tieleman DP.

Acc Chem Res. 2014 Aug 19;47(8):2244-51. doi: 10.1021/ar4002729. Epub 2014 Jun 3.

PMID:
24892900
5.

Effect of acetone accumulation on structure and dynamics of lipid membranes studied by molecular dynamics simulations.

Posokhov YO, Kyrychenko A.

Comput Biol Chem. 2013 Oct;46:23-31. doi: 10.1016/j.compbiolchem.2013.04.005. Epub 2013 May 7.

PMID:
23764528
6.

Molecular binding of catechins to biomembranes: relationship to biological activity.

Sirk TW, Brown EF, Friedman M, Sum AK.

J Agric Food Chem. 2009 Aug 12;57(15):6720-8. doi: 10.1021/jf900951w.

PMID:
19572638
7.

Structure and dynamics of phospholamban in solution and in membrane bilayer: computer simulations.

Houndonougbo Y, Kuczera K, Jas GS.

Biochemistry. 2005 Feb 15;44(6):1780-92.

PMID:
15697203
8.

Do sterols reduce proton and sodium leaks through lipid bilayers?

Haines TH.

Prog Lipid Res. 2001 Jul;40(4):299-324. Review.

PMID:
11412894
9.

Coexistence of two adamantane binding sites in the influenza A M2 ion channel.

Rosenberg MR, Casarotto MG.

Proc Natl Acad Sci U S A. 2010 Aug 3;107(31):13866-71. doi: 10.1073/pnas.1002051107. Epub 2010 Jul 19.

10.

The potassium channel KcsA and its interaction with the lipid bilayer.

Williamson IM, Alvis SJ, East JM, Lee AG.

Cell Mol Life Sci. 2003 Aug;60(8):1581-90. Review.

PMID:
14513833
11.

Interaction of cisplatin and two potential antitumoral platinum(II) complexes with a model lipid membrane: a combined NMR and MD study.

Nierzwicki L, Wieczor M, Censi V, Baginski M, Calucci L, Samaritani S, Czub J, Forte C.

Phys Chem Chem Phys. 2015 Jan 14;17(2):1458-68. doi: 10.1039/c4cp04360j. Epub 2014 Nov 28.

PMID:
25429970
12.

Interaction between K+ channel gate modifier hanatoxin and lipid bilayer membranes analyzed by molecular dynamics simulation.

Nishizawa M, Nishizawa K.

Eur Biophys J. 2006 May;35(5):373-81. Epub 2006 Feb 2.

PMID:
16453153
13.

Lipid interaction and membrane perturbation of human islet amyloid polypeptide monomer and dimer by molecular dynamics simulations.

Zhang Y, Luo Y, Deng Y, Mu Y, Wei G.

PLoS One. 2012;7(5):e38191. doi: 10.1371/journal.pone.0038191. Epub 2012 May 31.

14.

Molecular dynamics simulations of lipid bilayers: simple recipe of how to do it.

Martinez-Seara H, Róg T.

Methods Mol Biol. 2013;924:407-29. doi: 10.1007/978-1-62703-017-5_15.

PMID:
23034757
15.

Calculation of the electrostatic potential of lipid bilayers from molecular dynamics simulations: methodological issues.

Gurtovenko AA, Vattulainen I.

J Chem Phys. 2009 Jun 7;130(21):215107. doi: 10.1063/1.3148885.

PMID:
19508106
16.

Characterization of conformation and interaction of gene delivery vector polyethylenimine with phospholipid bilayer at different protonation state.

Choudhury CK, Kumar A, Roy S.

Biomacromolecules. 2013 Oct 14;14(10):3759-68. doi: 10.1021/bm4011408. Epub 2013 Oct 3.

PMID:
24050382
17.
18.

Molecular dynamics simulation of the partitioning of benzocaine and phenytoin into a lipid bilayer.

Martin LJ, Chao R, Corry B.

Biophys Chem. 2014 Jan;185:98-107. doi: 10.1016/j.bpc.2013.12.003. Epub 2013 Dec 14.

PMID:
24406394
20.

Nanomechanical characterization of phospholipid bilayer islands on flat and porous substrates: a force spectroscopy study.

Nussio MR, Oncins G, Ridelis I, Szili E, Shapter JG, Sanz F, Voelcker NH.

J Phys Chem B. 2009 Jul 30;113(30):10339-47. doi: 10.1021/jp811035g.

PMID:
19572625

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