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Items: 1 to 20 of 121

1.

Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future.

Machida M, Yamada O, Gomi K.

DNA Res. 2008 Aug;15(4):173-83. doi: 10.1093/dnares/dsn020. Review.

2.

Genomics of Aspergillus oryzae.

Kobayashi T, Abe K, Asai K, Gomi K, Juvvadi PR, Kato M, Kitamoto K, Takeuchi M, Machida M.

Biosci Biotechnol Biochem. 2007 Mar;71(3):646-70. Epub 2007 Mar 7. Review.

3.

Impact of Aspergillus oryzae genomics on industrial production of metabolites.

Abe K, Gomi K, Hasegawa F, Machida M.

Mycopathologia. 2006 Sep;162(3):143-53. Review.

PMID:
16944282
4.

Cell biology of the Koji mold Aspergillus oryzae.

Kitamoto K.

Biosci Biotechnol Biochem. 2015;79(6):863-9. doi: 10.1080/09168451.2015.1023249. Epub 2015 Mar 17. Review.

PMID:
25776568
5.

Comparative genomic analysis of Aspergillus oryzae strains 3.042 and RIB40 for soy sauce fermentation.

Zhao G, Yao Y, Wang C, Hou L, Cao X.

Int J Food Microbiol. 2013 Jun 17;164(2-3):148-54. doi: 10.1016/j.ijfoodmicro.2013.03.027. Epub 2013 Apr 9.

PMID:
23673060
6.

Comparison of the genomes and transcriptomes associated with the different protease secretions of Aspergillus oryzae 100-8 and 3.042.

Zhao G, Yao Y, Hou L, Wang C, Cao X.

Biotechnol Lett. 2014 Oct;36(10):2053-8. doi: 10.1007/s10529-014-1574-6. Epub 2014 Jul 22.

PMID:
25048221
7.
8.

Genome sequencing and analysis of Aspergillus oryzae.

Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H.

Nature. 2005 Dec 22;438(7071):1157-61.

PMID:
16372010
9.

Genomics of industrial Aspergilli and comparison with toxigenic relatives.

Machida M, Terabayashi Y, Sano M, Yamane N, Tamano K, Payne GA, Yu J, Cleveland TE, Nierman WC.

Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2008 Sep;25(9):1147-51. doi: 10.1080/02652030802273114.

PMID:
18798040
10.

Reduction of the degradation activity of umami-enhancing purinic ribonucleotide supplement in miso by the targeted suppression of acid phosphatases in the Aspergillus oryzae starter culture.

Marui J, Tada S, Fukuoka M, Wagu Y, Shiraishi Y, Kitamoto N, Sugimoto T, Hattori R, Suzuki S, Kusumoto K.

Int J Food Microbiol. 2013 Sep 2;166(2):238-43. doi: 10.1016/j.ijfoodmicro.2013.07.006. Epub 2013 Jul 18.

PMID:
23973834
11.

Transcriptome and Proteome Expression Analysis of the Metabolism of Amino Acids by the Fungus Aspergillus oryzae in Fermented Soy Sauce.

Zhao G, Yao Y, Wang C, Tian F, Liu X, Hou L, Yang Z, Zhao J, Zhang H, Cao X.

Biomed Res Int. 2015;2015:456802. doi: 10.1155/2015/456802. Epub 2015 Apr 7.

12.

Breeding and identification of novel koji molds with high activity of acid protease by genome recombination between Aspergillus oryzae and Aspergillus niger.

Xu D, Pan L, Zhao H, Zhao M, Sun J, Liu D.

J Ind Microbiol Biotechnol. 2011 Sep;38(9):1255-65. doi: 10.1007/s10295-010-0904-5. Epub 2010 Nov 24.

PMID:
21107641
13.

Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae.

Vongsangnak W, Olsen P, Hansen K, Krogsgaard S, Nielsen J.

BMC Genomics. 2008 May 23;9:245. doi: 10.1186/1471-2164-9-245.

14.

Breeding research on sake yeasts in Japan: history, recent technological advances, and future perspectives.

Kitagaki H, Kitamoto K.

Annu Rev Food Sci Technol. 2013;4:215-35. doi: 10.1146/annurev-food-030212-182545. Review.

PMID:
23464572
15.

Genome-scale analysis of the high-efficient protein secretion system of Aspergillus oryzae.

Liu L, Feizi A, Österlund T, Hjort C, Nielsen J.

BMC Syst Biol. 2014 Jun 24;8:73. doi: 10.1186/1752-0509-8-73.

16.

Comparison and analysis of the genomes of two Aspergillus oryzae strains.

Zhao G, Yao Y, Chen W, Cao X.

J Agric Food Chem. 2013 Aug 14;61(32):7805-9. doi: 10.1021/jf400080g. Epub 2013 Aug 5.

PMID:
23889147
17.

Draft genome sequence of Aspergillus oryzae strain 3.042.

Zhao G, Yao Y, Qi W, Wang C, Hou L, Zeng B, Cao X.

Eukaryot Cell. 2012 Sep;11(9):1178. doi: 10.1128/EC.00160-12.

18.

Analysis of the ionic interaction between the hydrophobin RodA and two cutinases of Aspergillus nidulans obtained via an Aspergillus oryzae expression system.

Tanaka T, Nakayama M, Takahashi T, Nanatani K, Yamagata Y, Abe K.

Appl Microbiol Biotechnol. 2017 Mar;101(6):2343-2356. doi: 10.1007/s00253-016-7979-5. Epub 2016 Dec 5.

PMID:
27917435
19.

Transcriptional regulation of genes on the non-syntenic blocks of Aspergillus oryzae and its functional relationship to solid-state cultivation.

Tamano K, Sano M, Yamane N, Terabayashi Y, Toda T, Sunagawa M, Koike H, Hatamoto O, Umitsuki G, Takahashi T, Koyama Y, Asai R, Abe K, Machida M.

Fungal Genet Biol. 2008 Feb;45(2):139-51. Epub 2007 Sep 25.

PMID:
17967552
20.

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing.

Wang B, Guo G, Wang C, Lin Y, Wang X, Zhao M, Guo Y, He M, Zhang Y, Pan L.

Nucleic Acids Res. 2010 Aug;38(15):5075-87. doi: 10.1093/nar/gkq256. Epub 2010 Apr 14.

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