Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 81

1.

The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana.

Aceituno FF, Moseyko N, Rhee SY, Gutiérrez RA.

BMC Genomics. 2008 Sep 23;9:438. doi: 10.1186/1471-2164-9-438.

2.

Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate.

Krouk G, Mirowski P, LeCun Y, Shasha DE, Coruzzi GM.

Genome Biol. 2010;11(12):R123. doi: 10.1186/gb-2010-11-12-r123. Epub 2010 Dec 23.

3.

A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis.

Kawanabe T, Fujimoto R, Sasaki T, Taylor JM, Dennis ES.

Gene. 2012 Sep 15;506(2):301-9. doi: 10.1016/j.gene.2012.07.003. Epub 2012 Jul 13.

PMID:
22796129
4.

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana.

Zhang X, Bernatavichute YV, Cokus S, Pellegrini M, Jacobsen SE.

Genome Biol. 2009;10(6):R62. doi: 10.1186/gb-2009-10-6-r62. Epub 2009 Jun 9.

5.

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis.

Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan SW, Chen H, Henderson IR, Shinn P, Pellegrini M, Jacobsen SE, Ecker JR.

Cell. 2006 Sep 22;126(6):1189-201. Epub 2006 Aug 31.

6.

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S.

Nat Genet. 2007 Jan;39(1):61-9. Epub 2006 Nov 26.

PMID:
17128275
7.

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis.

Vanderauwera S, Zimmermann P, Rombauts S, Vandenabeele S, Langebartels C, Gruissem W, Inzé D, Van Breusegem F.

Plant Physiol. 2005 Oct;139(2):806-21. Epub 2005 Sep 23.

8.

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds.

McKeown PC, Laouielle-Duprat S, Prins P, Wolff P, Schmid MW, Donoghue MT, Fort A, Duszynska D, Comte A, Lao NT, Wennblom TJ, Smant G, Köhler C, Grossniklaus U, Spillane C.

BMC Plant Biol. 2011 Aug 12;11:113. doi: 10.1186/1471-2229-11-113.

10.
11.

Natural variation in DNA methylation in ribosomal RNA genes of Arabidopsis thaliana.

Woo HR, Richards EJ.

BMC Plant Biol. 2008 Sep 10;8:92. doi: 10.1186/1471-2229-8-92.

12.
13.

AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling.

Rehrauer H, Aquino C, Gruissem W, Henz SR, Hilson P, Laubinger S, Naouar N, Patrignani A, Rombauts S, Shu H, Van de Peer Y, Vuylsteke M, Weigel D, Zeller G, Hennig L.

Plant Physiol. 2010 Feb;152(2):487-99. doi: 10.1104/pp.109.150185. Epub 2009 Dec 23.

14.

Atypical DNA methylation of genes encoding cysteine-rich peptides in Arabidopsis thaliana.

You W, Tyczewska A, Spencer M, Daxinger L, Schmid MW, Grossniklaus U, Simon SA, Meyers BC, Matzke AJ, Matzke M.

BMC Plant Biol. 2012 Apr 19;12:51. doi: 10.1186/1471-2229-12-51.

15.

A genome-wide transcriptional analysis using Arabidopsis thaliana Affymetrix gene chips determined plant responses to phosphate deprivation.

Misson J, Raghothama KG, Jain A, Jouhet J, Block MA, Bligny R, Ortet P, Creff A, Somerville S, Rolland N, Doumas P, Nacry P, Herrerra-Estrella L, Nussaume L, Thibaud MC.

Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11934-9. Epub 2005 Aug 5.

16.

Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation.

Day RC, Herridge RP, Ambrose BA, Macknight RC.

Plant Physiol. 2008 Dec;148(4):1964-84. doi: 10.1104/pp.108.128108. Epub 2008 Oct 15.

17.

Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.

Wirta V, Holmberg A, Lukacs M, Nilsson P, Hilson P, Uhlén M, Bhalerao RP, Lundeberg J.

BMC Biotechnol. 2005 Feb 3;5:5.

18.
19.

Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots.

Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-López O, Tamayo KP, Aceituno F, Gómez I, Ruffel S, Lejay L, Jordana X, Gutiérrez RA.

Plant J. 2014 Oct;80(1):1-13. doi: 10.1111/tpj.12618. Epub 2014 Aug 25.

20.

Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target genes.

Naouar N, Vandepoele K, Lammens T, Casneuf T, Zeller G, van Hummelen P, Weigel D, Rätsch G, Inzé D, Kuiper M, De Veylder L, Vuylsteke M.

Plant J. 2009 Jan;57(1):184-94. doi: 10.1111/j.1365-313X.2008.03662.x. Epub 2008 Sep 19. Erratum in: Plant J. 2017 Sep;91(6):1129-1130.

Supplemental Content

Support Center