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Items: 1 to 20 of 75

1.

Dynamical analysis on gene activity in the presence of repressors and an interfering promoter.

Nakanishi H, Mitarai N, Sneppen K.

Biophys J. 2008 Nov 1;95(9):4228-40. doi: 10.1529/biophysj.108.132894. Epub 2008 Jul 25.

2.

The role of repressor kinetics in relief of transcriptional interference between convergent promoters.

Hao N, Palmer AC, Ahlgren-Berg A, Shearwin KE, Dodd IB.

Nucleic Acids Res. 2016 Aug 19;44(14):6625-38. doi: 10.1093/nar/gkw600. Epub 2016 Jul 4.

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Modulation of P(RM) activity by the lambda PR promoter in both the presence and absence of repressor.

Fong RS, Woody S, Gussin GN.

J Mol Biol. 1993 Aug 5;232(3):792-804.

PMID:
8355271
6.

Mechanisms of transcriptional repression.

Rojo F.

Curr Opin Microbiol. 2001 Apr;4(2):145-51. Review.

PMID:
11282469
7.

On the mechanism of inhibition of phage T7 RNA polymerase by lac repressor.

Lopez PJ, Guillerez J, Sousa R, Dreyfus M.

J Mol Biol. 1998 Mar 13;276(5):861-75.

PMID:
9566192
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Advances in bacterial promoter recognition and its control by factors that do not bind DNA.

Haugen SP, Ross W, Gourse RL.

Nat Rev Microbiol. 2008 Jul;6(7):507-19. doi: 10.1038/nrmicro1912. Epub 2008 Jun 3. Review.

15.

Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli.

Yang J, Hwang JS, Camakaris H, Irawaty W, Ishihama A, Pittard J.

Mol Microbiol. 2004 Apr;52(1):243-56.

16.

Metalloregulator CueR biases RNA polymerase's kinetic sampling of dead-end or open complex to repress or activate transcription.

Martell DJ, Joshi CP, Gaballa A, Santiago AG, Chen TY, Jung W, Helmann JD, Chen P.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13467-72. doi: 10.1073/pnas.1515231112. Epub 2015 Oct 19.

17.

Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors.

Palmer AC, Egan JB, Shearwin KE.

Transcription. 2011 Jan-Feb;2(1):9-14. doi: 10.4161/trns.2.1.13511.

18.

From sequence to dynamics: the effects of transcription factor and polymerase concentration changes on activated and repressed promoters.

Pérez AG, Angarica VE, Collado-Vides J, Vasconcelos AT.

BMC Mol Biol. 2009 Sep 22;10:92. doi: 10.1186/1471-2199-10-92.

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Interference by PR-bound RNA polymerase with PRM function in vitro. Modulation by the bacteriophage lambda cI protein.

Hershberger PA, Mita BC, Tripatara A, deHaseth PL.

J Biol Chem. 1993 Apr 25;268(12):8943-8.

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