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Items: 1 to 20 of 139

1.

Crowding effects on diffusion in solutions and cells.

Dix JA, Verkman AS.

Annu Rev Biophys. 2008;37:247-63. doi: 10.1146/annurev.biophys.37.032807.125824. Review.

PMID:
18573081
2.

Anomalous diffusion and multifractional Brownian motion: simulating molecular crowding and physical obstacles in systems biology.

Marquez-Lago TT, Leier A, Burrage K.

IET Syst Biol. 2012 Aug;6(4):134-42. doi: 10.1049/iet-syb.2011.0049.

PMID:
23039694
3.
4.

Excluded volume effects in on- and off-lattice reaction-diffusion models.

Meinecke L, Eriksson M.

IET Syst Biol. 2017 Apr;11(2):55-64. doi: 10.1049/iet-syb.2016.0021.

PMID:
28476973
5.

Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm.

Ridgway D, Broderick G, Lopez-Campistrous A, Ru'aini M, Winter P, Hamilton M, Boulanger P, Kovalenko A, Ellison MJ.

Biophys J. 2008 May 15;94(10):3748-59. doi: 10.1529/biophysj.107.116053. Epub 2008 Jan 30. Erratum in: Biophys J. 2009 Mar 18;96(6):2548.

6.

Non-Brownian diffusion in lipid membranes: Experiments and simulations.

Metzler R, Jeon JH, Cherstvy AG.

Biochim Biophys Acta. 2016 Oct;1858(10):2451-2467. doi: 10.1016/j.bbamem.2016.01.022. Epub 2016 Jan 28. Review.

7.

Anomalous subdiffusion is a measure for cytoplasmic crowding in living cells.

Weiss M, Elsner M, Kartberg F, Nilsson T.

Biophys J. 2004 Nov;87(5):3518-24. Epub 2004 Aug 31.

8.

Anomalous diffusion due to hindering by mobile obstacles undergoing Brownian motion or Orstein-Ulhenbeck processes.

Berry H, Chaté H.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022708. Epub 2014 Feb 7.

PMID:
25353510
9.

Lateral diffusion in a discrete fluid membrane with immobile particles.

Kalay Z, Fujiwara TK, Otaka A, Kusumi A.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022724. Epub 2014 Feb 26.

PMID:
25353525
10.

Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes.

Javanainen M, Hammaren H, Monticelli L, Jeon JH, Miettinen MS, Martinez-Seara H, Metzler R, Vattulainen I.

Faraday Discuss. 2013;161:397-417; discussion 419-59.

PMID:
23805752
11.

Electrodiffusion of molecules in aqueous media: a robust, discretized description for electroporation and other transport phenomena.

Smith KC, Weaver JC.

IEEE Trans Biomed Eng. 2012 Jun;59(6):1514-22. doi: 10.1109/TBME.2011.2180378. Epub 2011 Dec 19.

PMID:
22194231
12.

Stability of a directional solidification front in subdiffusive media.

Hamed MA, Nepomnyashchy AA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Jan;89(1):012408. Epub 2014 Jan 27.

PMID:
24580238
13.

Anomalous transport in the crowded world of biological cells.

Höfling F, Franosch T.

Rep Prog Phys. 2013 Apr;76(4):046602. doi: 10.1088/0034-4885/76/4/046602. Epub 2013 Mar 12. Review.

PMID:
23481518
14.

Electrodiffusion: a continuum modeling framework for biomolecular systems with realistic spatiotemporal resolution.

Lu B, Zhou YC, Huber GA, Bond SD, Holst MJ, McCammon JA.

J Chem Phys. 2007 Oct 7;127(13):135102.

PMID:
17919055
15.

Formation of protein complexes in crowded environments--from in vitro to in vivo.

Phillip Y, Schreiber G.

FEBS Lett. 2013 Apr 17;587(8):1046-52. doi: 10.1016/j.febslet.2013.01.007. Epub 2013 Jan 18. Review.

16.

Anomalous diffusion of oligomerized transmembrane proteins.

Schmidt U, Weiss M.

J Chem Phys. 2011 Apr 28;134(16):165101. doi: 10.1063/1.3582336.

PMID:
21528980
17.

Dynamics in crowded environments: is non-Gaussian Brownian diffusion normal?

Kwon G, Sung BJ, Yethiraj A.

J Phys Chem B. 2014 Jul 17;118(28):8128-34. doi: 10.1021/jp5011617. Epub 2014 May 5.

PMID:
24779432
18.

Computer simulations of protein diffusion in compartmentalized cell membranes.

Sung BJ, Yethiraj A.

Biophys J. 2009 Jul 22;97(2):472-9. doi: 10.1016/j.bpj.2009.04.060.

19.

Through the eye of the needle: recent advances in understanding biopolymer translocation.

Panja D, Barkema GT, Kolomeisky AB.

J Phys Condens Matter. 2013 Oct 16;25(41):413101. doi: 10.1088/0953-8984/25/41/413101. Epub 2013 Sep 11. Review.

PMID:
24025200
20.

Anomalous diffusion of symmetric and asymmetric active colloids.

Golestanian R.

Phys Rev Lett. 2009 May 8;102(18):188305. Epub 2009 May 8.

PMID:
19518919

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