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Items: 1 to 20 of 98


Phenotype-defining functions of multiple non-coding RNA pathways.

Glinsky GV.

Cell Cycle. 2008 Jun 1;7(11):1630-9. Epub 2008 Mar 19.


Identification and characterization of microRNAs and endogenous siRNAs in Schistosoma japonicum.

Hao L, Cai P, Jiang N, Wang H, Chen Q.

BMC Genomics. 2010 Jan 21;11:55. doi: 10.1186/1471-2164-11-55.


Human genome connectivity code links disease-associated SNPs, microRNAs and pyknons.

Glinsky GV.

Cell Cycle. 2009 Mar 15;8(6):925-30. Epub 2009 Mar 26.


Bovine ncRNAs are abundant, primarily intergenic, conserved and associated with regulatory genes.

Qu Z, Adelson DL.

PLoS One. 2012;7(8):e42638. doi: 10.1371/journal.pone.0042638. Epub 2012 Aug 6.


Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing.

Li T, Wang S, Wu R, Zhou X, Zhu D, Zhang Y.

Genomics. 2012 May;99(5):292-8. doi: 10.1016/j.ygeno.2012.02.003. Epub 2012 Feb 20.


Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions.

Steigele S, Huber W, Stocsits C, Stadler PF, Nieselt K.

BMC Biol. 2007 Jun 18;5:25.


Does every transcript originate from a gene?

Raabe CA, Brosius J.

Ann N Y Acad Sci. 2015 Apr;1341:136-48. doi: 10.1111/nyas.12741.


Raising the estimate of functional human sequences.

Pheasant M, Mattick JS.

Genome Res. 2007 Sep;17(9):1245-53. Epub 2007 Aug 9. Review.


Non-coding sequence retrieval system for comparative genomic analysis of gene regulatory elements.

Doh ST, Zhang Y, Temple MH, Cai L.

BMC Bioinformatics. 2007 Mar 15;8:94.


RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles.

Webb A, Papp AC, Curtis A, Newman LC, Pietrzak M, Seweryn M, Handelman SK, Rempala GA, Wang D, Graziosa E, Tyndale RF, Lerman C, Kelsoe JR, Mash DC, Sadee W.

BMC Genomics. 2015 Nov 23;16:990. doi: 10.1186/s12864-015-2207-8.


Epistatic selection between coding and regulatory variation in human evolution and disease.

Lappalainen T, Montgomery SB, Nica AC, Dermitzakis ET.

Am J Hum Genet. 2011 Sep 9;89(3):459-63. doi: 10.1016/j.ajhg.2011.08.004.


SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions.

Kim BC, Kim WY, Park D, Chung WH, Shin KS, Bhak J.

BMC Bioinformatics. 2008;9 Suppl 1:S2. doi: 10.1186/1471-2105-9-S1-S2.


Human polymorphisms at long non-coding RNAs (lncRNAs) and association with prostate cancer risk.

Jin G, Sun J, Isaacs SD, Wiley KE, Kim ST, Chu LW, Zhang Z, Zhao H, Zheng SL, Isaacs WB, Xu J.

Carcinogenesis. 2011 Nov;32(11):1655-9. doi: 10.1093/carcin/bgr187. Epub 2011 Aug 19.


DASHR: database of small human noncoding RNAs.

Leung YY, Kuksa PP, Amlie-Wolf A, Valladares O, Ungar LH, Kannan S, Gregory BD, Wang LS.

Nucleic Acids Res. 2016 Jan 4;44(D1):D216-22. doi: 10.1093/nar/gkv1188. Epub 2015 Nov 8.


Functional repeat-derived RNAs often originate from retrotransposon-propagated ncRNAs.

Matylla-Kulinska K, Tafer H, Weiss A, Schroeder R.

Wiley Interdiscip Rev RNA. 2014 Sep-Oct;5(5):591-600. doi: 10.1002/wrna.1243. Epub 2014 Jul 9.


Multiple RNAs from the mouse carboxypeptidase M locus: functional RNAs or transcription noise?

GuimarĂ£es AO, Motta FL, Alves VS, Castilho BA, Pesquero JB.

BMC Mol Biol. 2009 Feb 8;10:7. doi: 10.1186/1471-2199-10-7.

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