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Importance of the interferon-alpha system in murine large intestine indicated by microarray analysis of commensal bacteria-induced immunological changes.

Munakata K, Yamamoto M, Anjiki N, Nishiyama M, Imamura S, Iizuka S, Takashima K, Ishige A, Hioki K, Ohnishi Y, Watanabe K.

BMC Genomics. 2008 Apr 26;9:192. doi: 10.1186/1471-2164-9-192.


A microarray analysis of gnotobiotic mice indicating that microbial exposure during the neonatal period plays an essential role in immune system development.

Yamamoto M, Yamaguchi R, Munakata K, Takashima K, Nishiyama M, Hioki K, Ohnishi Y, Nagasaki M, Imoto S, Miyano S, Ishige A, Watanabe K.

BMC Genomics. 2012 Jul 23;13:335. doi: 10.1186/1471-2164-13-335.


Microarray analysis on germfree mice elucidates the primary target of a traditional Japanese medicine juzentaihoto: acceleration of IFN-α response via affecting the ISGF3-IRF7 signaling cascade.

Munakata K, Takashima K, Nishiyama M, Asano N, Mase A, Hioki K, Ohnishi Y, Yamamoto M, Watanabe K.

BMC Genomics. 2012 Jan 18;13:30. doi: 10.1186/1471-2164-13-30.


Physiological roles of gammadelta T-cell receptor intraepithelial lymphocytes in cytoproliferation and differentiation of mouse intestinal epithelial cells.

Matsumoto S, Nanno M, Watanabe N, Miyashita M, Amasaki H, Suzuki K, Umesaki Y.

Immunology. 1999 May;97(1):18-25.


Gut flora, Toll-like receptors and nuclear receptors: a tripartite communication that tunes innate immunity in large intestine.

Lundin A, Bok CM, Aronsson L, Björkholm B, Gustafsson JA, Pott S, Arulampalam V, Hibberd M, Rafter J, Pettersson S.

Cell Microbiol. 2008 May;10(5):1093-103. Epub 2007 Dec 17.


Striking phenotypic and functional differences in lamina propria lymphocytes from the large and small intestine of mice.

Reséndiz-Albor AA, Esquivel R, López-Revilla R, Verdín L, Moreno-Fierros L.

Life Sci. 2005 Apr 29;76(24):2783-803.


Intestinal Bifidobacterium association in germ-free T cell receptor transgenic mice down-regulates dietary antigen-specific immune responses of the small intestine but enhances those of the large intestine.

Tsuda M, Hosono A, Yanagibashi T, Hachimura S, Hirayama K, Umesaki Y, Itoh K, Takahashi K, Kaminogawa S.

Immunobiology. 2009;214(4):279-89. doi: 10.1016/j.imbio.2008.09.005. Epub 2008 Nov 13.


Regional specialization of intraepithelial T cells in the murine small and large intestine.

Boll G, Rudolphi A, Spiess S, Reimann J.

Scand J Immunol. 1995 Feb;41(2):103-13.


Regional variations in Paneth cell antimicrobial peptide expression along the mouse intestinal tract.

Karlsson J, Pütsep K, Chu H, Kays RJ, Bevins CL, Andersson M.

BMC Immunol. 2008 Jul 17;9:37. doi: 10.1186/1471-2172-9-37.


Gamma delta TCR-bearing intraepithelial lymphocytes regulate class II major histocompatibility complex molecule expression on the mouse small intestinal epithelium.

Matsumoto S, Setoyama H, Imaoka A, Okada Y, Amasaki H, Suzuki K, Umesaki Y.

Epithelial Cell Biol. 1995;4(4):163-70.


Specific interferon genes are expressed in individual cells in the peritoneum and bone marrow of normal mice.

Proietti E, Vanden Broecke C, Di Marzio P, Gessani S, Gresser I, Tovey MG.

J Interferon Res. 1992 Feb;12(1):27-34.


Transcriptome profiling of the small intestinal epithelium in germfree versus conventional piglets.

Chowdhury SR, King DE, Willing BP, Band MR, Beever JE, Lane AB, Loor JJ, Marini JC, Rund LA, Schook LB, Van Kessel AG, Gaskins HR.

BMC Genomics. 2007 Jul 5;8:215.


Commensal Escherichia coli reduces epithelial apoptosis through IFN-alphaA-mediated induction of guanylate binding protein-1 in human and murine models of developing intestine.

Mirpuri J, Brazil JC, Berardinelli AJ, Nasr TR, Cooper K, Schnoor M, Lin PW, Parkos CA, Louis NA.

J Immunol. 2010 Jun 15;184(12):7186-95. doi: 10.4049/jimmunol.0903116. Epub 2010 May 14.


Differential host gene expression in cells infected with highly pathogenic H5N1 avian influenza viruses.

Sarmento L, Afonso CL, Estevez C, Wasilenko J, Pantin-Jackwood M.

Vet Immunol Immunopathol. 2008 Oct 15;125(3-4):291-302. doi: 10.1016/j.vetimm.2008.05.021. Epub 2008 Jun 3.


Abundant and diverse fungal microbiota in the murine intestine.

Scupham AJ, Presley LL, Wei B, Bent E, Griffith N, McPherson M, Zhu F, Oluwadara O, Rao N, Braun J, Borneman J.

Appl Environ Microbiol. 2006 Jan;72(1):793-801.


Reduction in p48-ISGFgamma levels confers resistance to interferon-alpha2a in MHCC97 cells.

Wu WZ, Sun HC, Gao YQ, Li Y, Wang L, Zhou K, Liu KD, Iliakis G, Tang ZY.

Oncology. 2004;67(5-6):428-40.


The effect of weaning on the clonality of alpha beta T-cell receptor T cells in the intestine of GF and SPF mice.

Probert CS, Williams AM, Stepankova R, Tlaskalova-Hogenova H, Phillips A, Bland PW.

Dev Comp Immunol. 2007;31(6):606-17. Epub 2006 Oct 6.


Abnormal Paneth cell granule dissolution and compromised resistance to bacterial colonization in the intestine of CF mice.

Clarke LL, Gawenis LR, Bradford EM, Judd LM, Boyle KT, Simpson JE, Shull GE, Tanabe H, Ouellette AJ, Franklin CL, Walker NM.

Am J Physiol Gastrointest Liver Physiol. 2004 Jun;286(6):G1050-8. Epub 2004 Jan 8.


Suppression of iodide uptake and thyroid hormone synthesis with stimulation of the type I interferon system by double-stranded ribonucleic acid in cultured human thyroid follicles.

Yamazaki K, Suzuki K, Yamada E, Yamada T, Takeshita F, Matsumoto M, Mitsuhashi T, Obara T, Takano K, Sato K.

Endocrinology. 2007 Jul;148(7):3226-35. Epub 2007 Mar 29.


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