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Items: 1 to 20 of 86

1.

Engineering BioBrick vectors from BioBrick parts.

Shetty RP, Endy D, Knight TF Jr.

J Biol Eng. 2008 Apr 14;2:5. doi: 10.1186/1754-1611-2-5.

2.

Assembly of BioBrick standard biological parts using three antibiotic assembly.

Shetty R, Lizarazo M, Rettberg R, Knight TF.

Methods Enzymol. 2011;498:311-26. doi: 10.1016/B978-0-12-385120-8.00013-9.

PMID:
21601683
3.

Introduction of customized inserts for s-treamlined assembly and optimization of BioBrick synthetic genetic circuits.

Norville JE, Derda R, Gupta S, Drinkwater KA, Belcher AM, Leschziner AE, Knight TF Jr.

J Biol Eng. 2010 Dec 20;4:17. doi: 10.1186/1754-1611-4-17.

4.

Assembly of standardized DNA parts using BioBrick ends in E. coli.

Ho-Shing O, Lau KH, Vernon W, Eckdahl TT, Campbell AM.

Methods Mol Biol. 2012;852:61-76. doi: 10.1007/978-1-61779-564-0_6.

PMID:
22328426
5.

BioBrick assembly standards and techniques and associated software tools.

Røkke G, Korvald E, Pahr J, Oyås O, Lale R.

Methods Mol Biol. 2014;1116:1-24. doi: 10.1007/978-1-62703-764-8_1.

PMID:
24395353
6.

Measuring the activity of BioBrick promoters using an in vivo reference standard.

Kelly JR, Rubin AJ, Davis JH, Ajo-Franklin CM, Cumbers J, Czar MJ, de Mora K, Glieberman AL, Monie DD, Endy D.

J Biol Eng. 2009 Mar 20;3:4. doi: 10.1186/1754-1611-3-4.

7.

The Bacillus BioBrick Box: generation and evaluation of essential genetic building blocks for standardized work with Bacillus subtilis.

Radeck J, Kraft K, Bartels J, Cikovic T, Dürr F, Emenegger J, Kelterborn S, Sauer C, Fritz G, Gebhard S, Mascher T.

J Biol Eng. 2013 Dec 2;7(1):29. doi: 10.1186/1754-1611-7-29.

8.

A BioBrick compatible strategy for genetic modification of plants.

Boyle PM, Burrill DR, Inniss MC, Agapakis CM, Deardon A, DeWerd JG, Gedeon MA, Quinn JY, Paull ML, Raman AM, Theilmann MR, Wang L, Winn JC, Medvedik O, Schellenberg K, Haynes KA, Viel A, Brenner TJ, Church GM, Shah JV, Silver PA.

J Biol Eng. 2012 Jun 20;6(1):8. doi: 10.1186/1754-1611-6-8.

9.

Biobrick chain recommendations for genetic circuit design.

Yang J, Yu S, Gong B, An N, Alterovitz G.

Comput Biol Med. 2017 Jul 1;86:31-39. doi: 10.1016/j.compbiomed.2017.04.019. Epub 2017 May 3.

PMID:
28499216
10.

The case for decoupling assembly and submission standards to maintain a more flexible registry of biological parts.

Alnahhas RN, Slater B, Huang Y, Mortensen C, Monk JW, Okasheh Y, Howard MD, Gottel NR, Hammerling MJ, Barrick JE.

J Biol Eng. 2014 Dec 1;8(1):28. doi: 10.1186/1754-1611-8-28. eCollection 2014.

11.

Promoter element arising from the fusion of standard BioBrick parts.

Yao AI, Fenton TA, Owsley K, Seitzer P, Larsen DJ, Sit H, Lau J, Nair A, Tantiongloc J, Tagkopoulos I, Facciotti MT.

ACS Synth Biol. 2013 Feb 15;2(2):111-20. doi: 10.1021/sb300114d. Epub 2013 Jan 11. Erratum in: ACS Synth Biol. 2013 Jun 21;2(6):351.

PMID:
23656374
12.

C-Brick: A New Standard for Assembly of Biological Parts Using Cpf1.

Li SY, Zhao GP, Wang J.

ACS Synth Biol. 2016 Dec 16;5(12):1383-1388. Epub 2016 Jun 17.

PMID:
27294364
13.

BglBricks: A flexible standard for biological part assembly.

Anderson JC, Dueber JE, Leguia M, Wu GC, Goler JA, Arkin AP, Keasling JD.

J Biol Eng. 2010 Jan 20;4(1):1. doi: 10.1186/1754-1611-4-1.

14.

Genetic assembly tools for synthetic biology.

Tsvetanova B, Peng L, Liang X, Li K, Yang JP, Ho T, Shirley J, Xu L, Potter J, Kudlicki W, Peterson T, Katzen F.

Methods Enzymol. 2011;498:327-48. doi: 10.1016/B978-0-12-385120-8.00014-0.

PMID:
21601684
15.

The Bacillus BioBrick Box 2.0: expanding the genetic toolbox for the standardized work with Bacillus subtilis.

Popp PF, Dotzler M, Radeck J, Bartels J, Mascher T.

Sci Rep. 2017 Nov 8;7(1):15058. doi: 10.1038/s41598-017-15107-z.

16.

Synthetic biology in cyanobacteria engineering and analyzing novel functions.

Heidorn T, Camsund D, Huang HH, Lindberg P, Oliveira P, Stensjö K, Lindblad P.

Methods Enzymol. 2011;497:539-79. doi: 10.1016/B978-0-12-385075-1.00024-X.

PMID:
21601103
17.

Standard virtual biological parts: a repository of modular modeling components for synthetic biology.

Cooling MT, Rouilly V, Misirli G, Lawson J, Yu T, Hallinan J, Wipat A.

Bioinformatics. 2010 Apr 1;26(7):925-31. doi: 10.1093/bioinformatics/btq063. Epub 2010 Feb 16.

PMID:
20160009
18.

One primer to rule them all: universal primer that adds BBa_B0034 ribosomal binding site to any coding standard 10 BioBrick.

Bryksin AV, Bachman HN, Cooper SW, Balavijayan T, Blackstone RM, Du H, Jenkins JP, Haynes CL, Siemer JL, Fiore VF, Barker TH.

ACS Synth Biol. 2014 Dec 19;3(12):956-9. doi: 10.1021/sb500047r.

19.

Rapid construction of insulated genetic circuits via synthetic sequence-guided isothermal assembly.

Torella JP, Boehm CR, Lienert F, Chen JH, Way JC, Silver PA.

Nucleic Acids Res. 2014 Jan;42(1):681-9. doi: 10.1093/nar/gkt860. Epub 2013 Sep 26.

20.

Standards not that standard.

Vilanova C, Tanner K, Dorado-Morales P, Villaescusa P, Chugani D, Frías A, Segredo E, Molero X, Fritschi M, Morales L, Ramón D, Peña C, Peretó J, Porcar M.

J Biol Eng. 2015 Oct 1;9:17. doi: 10.1186/s13036-015-0017-9. eCollection 2015.

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