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Retrotransposon Tf1 is targeted to Pol II promoters by transcription activators.

Leem YE, Ripmaster TL, Kelly FD, Ebina H, Heincelman ME, Zhang K, Grewal SI, Hoffman CS, Levin HL.

Mol Cell. 2008 Apr 11;30(1):98-107. doi: 10.1016/j.molcel.2008.02.016.


Determinants that specify the integration pattern of retrotransposon Tf1 in the fbp1 promoter of Schizosaccharomyces pombe.

Majumdar A, Chatterjee AG, Ripmaster TL, Levin HL.

J Virol. 2011 Jan;85(1):519-29. doi: 10.1128/JVI.01719-10. Epub 2010 Oct 27.


High-throughput sequencing of retrotransposon integration provides a saturated profile of target activity in Schizosaccharomyces pombe.

Guo Y, Levin HL.

Genome Res. 2010 Feb;20(2):239-48. doi: 10.1101/gr.099648.109. Epub 2009 Dec 29.


Transposon integration enhances expression of stress response genes.

Feng G, Leem YE, Levin HL.

Nucleic Acids Res. 2013 Jan;41(2):775-89. doi: 10.1093/nar/gks1185. Epub 2012 Nov 27.


Fission yeast retrotransposon Tf1 integration is targeted to 5' ends of open reading frames.

Behrens R, Hayles J, Nurse P.

Nucleic Acids Res. 2000 Dec 1;28(23):4709-16.


Single-Nucleotide-Specific Targeting of the Tf1 Retrotransposon Promoted by the DNA-Binding Protein Sap1 of Schizosaccharomyces pombe.

Hickey A, Esnault C, Majumdar A, Chatterjee AG, Iben JR, McQueen PG, Yang AX, Mizuguchi T, Grewal SI, Levin HL.

Genetics. 2015 Nov;201(3):905-24. doi: 10.1534/genetics.115.181602. Epub 2015 Sep 9.


Host factors that promote retrotransposon integration are similar in distantly related eukaryotes.

Rai SK, Sangesland M, Lee M Jr, Esnault C, Cui Y, Chatterjee AG, Levin HL.

PLoS Genet. 2017 Dec 12;13(12):e1006775. doi: 10.1371/journal.pgen.1006775. eCollection 2017 Dec.


Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots.

Mularoni L, Zhou Y, Bowen T, Gangadharan S, Wheelan SJ, Boeke JD.

Genome Res. 2012 Apr;22(4):693-703. doi: 10.1101/gr.129460.111. Epub 2012 Jan 4.


The evolution of transposons in Schizosaccharomyces pombe.

Kelly FD, Levin HL.

Cytogenet Genome Res. 2005;110(1-4):566-74.


The Long Terminal Repeat Retrotransposons Tf1 and Tf2 of Schizosaccharomyces pombe.

Esnault C, Levin HL.

Microbiol Spectr. 2015 Aug;3(4). doi: 10.1128/microbiolspec.MDNA3-0040-2014. Review.


Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions.

Zhu X, Wirén M, Sinha I, Rasmussen NN, Linder T, Holmberg S, Ekwall K, Gustafsson CM.

Mol Cell. 2006 Apr 21;22(2):169-78.


Arrested replication forks guide retrotransposon integration.

Jacobs JZ, Rosado-Lugo JD, Cranz-Mileva S, Ciccaglione KM, Tournier V, Zaratiegui M.

Science. 2015 Sep 25;349(6255):1549-53. doi: 10.1126/science.aaa3810.


Compromised RNA polymerase III complex assembly leads to local alterations of intergenic RNA polymerase II transcription in Saccharomyces cerevisiae.

Wang Q, Nowak CM, Korde A, Oh DH, Dassanayake M, Donze D.

BMC Biol. 2014 Oct 28;12:89. doi: 10.1186/s12915-014-0089-x.


Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs.

Hirota K, Miyoshi T, Kugou K, Hoffman CS, Shibata T, Ohta K.

Nature. 2008 Nov 6;456(7218):130-4. doi: 10.1038/nature07348. Epub 2008 Sep 28.


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