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Items: 1 to 20 of 493

1.

Modelling the structures of G protein-coupled receptors aided by three-dimensional validation.

Dastmalchi S, Church WB, Morris MB.

BMC Bioinformatics. 2008;9 Suppl 1:S14. doi: 10.1186/1471-2105-9-S1-S14.

2.

PREDICT modeling and in-silico screening for G-protein coupled receptors.

Shacham S, Marantz Y, Bar-Haim S, Kalid O, Warshaviak D, Avisar N, Inbal B, Heifetz A, Fichman M, Topf M, Naor Z, Noiman S, Becker OM.

Proteins. 2004 Oct 1;57(1):51-86.

PMID:
15326594
3.

Ab initio computational modeling of loops in G-protein-coupled receptors: lessons from the crystal structure of rhodopsin.

Mehler EL, Hassan SA, Kortagere S, Weinstein H.

Proteins. 2006 Aug 15;64(3):673-90.

PMID:
16729264
4.

Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models.

Worth CL, Kleinau G, Krause G.

PLoS One. 2009 Sep 16;4(9):e7011. doi: 10.1371/journal.pone.0007011.

6.

Towards 3D structures of G protein-coupled receptors: a multidisciplinary approach.

Müller G.

Curr Med Chem. 2000 Sep;7(9):861-88. Review.

PMID:
10911020
7.

Computational prediction of the coupling specificity of g protein-coupled receptors.

Jiang Z, Guan C, Zhou Y.

Appl Biochem Biotechnol. 2007 Apr;141(1):109-18. Review.

PMID:
17625269
8.

Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors.

Bhattacharya S, Hall SE, Vaidehi N.

J Mol Biol. 2008 Oct 3;382(2):539-55. doi: 10.1016/j.jmb.2008.06.084.

PMID:
18638482
9.

Rough set-based proteochemometrics modeling of G-protein-coupled receptor-ligand interactions.

Strömbergsson H, Prusis P, Midelfart H, Lapinsh M, Wikberg JE, Komorowski J.

Proteins. 2006 Apr 1;63(1):24-34.

PMID:
16435365
10.

Modeling the 3D structure of GPCRs from sequence.

Shacham S, Topf M, Avisar N, Glaser F, Marantz Y, Bar-Haim S, Noiman S, Naor Z, Becker OM.

Med Res Rev. 2001 Sep;21(5):472-83. Review.

PMID:
11579443
11.

Helix packing moments reveal diversity and conservation in membrane protein structure.

Liu W, Eilers M, Patel AB, Smith SO.

J Mol Biol. 2004 Mar 26;337(3):713-29.

PMID:
15019789
12.
13.

Assigning transmembrane segments to helices in intermediate-resolution structures.

Enosh A, Fleishman SJ, Ben-Tal N, Halperin D.

Bioinformatics. 2004 Aug 4;20 Suppl 1:i122-9.

14.

3D structural model of the G-protein-coupled cannabinoid CB2 receptor.

Xie XQ, Chen JZ, Billings EM.

Proteins. 2003 Nov 1;53(2):307-19.

PMID:
14517981
15.

BUNDLE: a program for building the transmembrane domains of G-protein-coupled receptors.

Filizola M, Perez JJ, Cartenì-Farina M.

J Comput Aided Mol Des. 1998 Mar;12(2):111-8.

PMID:
9690171
16.

Predicting GPCR-G-protein coupling using hidden Markov models.

Sreekumar KR, Huang Y, Pausch MH, Gulukota K.

Bioinformatics. 2004 Dec 12;20(18):3490-9.

17.
18.

De novo and inverse folding predictions of protein structure and dynamics.

Godzik A, Kolinski A, Skolnick J.

J Comput Aided Mol Des. 1993 Aug;7(4):397-438. Review.

PMID:
8229093
19.

Homology modeling of G-protein-coupled receptors and implications in drug design.

Patny A, Desai PV, Avery MA.

Curr Med Chem. 2006;13(14):1667-91. Review.

PMID:
16787212
20.

Deriving topology and sequence alignment for the helix skeleton in low-resolution protein density maps.

Lu Y, He J, Strauss CE.

J Bioinform Comput Biol. 2008 Feb;6(1):183-201.

PMID:
18324752
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