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Items: 1 to 20 of 588

1.

High-throughput bioinformatics with the Cyrille2 pipeline system.

Fiers MW, van der Burgt A, Datema E, de Groot JC, van Ham RC.

BMC Bioinformatics. 2008 Feb 12;9:96. doi: 10.1186/1471-2105-9-96.

2.

Biowep: a workflow enactment portal for bioinformatics applications.

Romano P, Bartocci E, Bertolini G, De Paoli F, Marra D, Mauri G, Merelli E, Milanesi L.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S19.

3.

The Gaggle: an open-source software system for integrating bioinformatics software and data sources.

Shannon PT, Reiss DJ, Bonneau R, Baliga NS.

BMC Bioinformatics. 2006 Mar 28;7:176.

4.

Constructing computational pipelines.

Halling-Brown M, Shepherd AJ.

Methods Mol Biol. 2008;453:451-70. doi: 10.1007/978-1-60327-429-6_24.

PMID:
18712319
5.

KDE Bioscience: platform for bioinformatics analysis workflows.

Lu Q, Hao P, Curcin V, He W, Li YY, Luo QM, Guo YK, Li YX.

J Biomed Inform. 2006 Aug;39(4):440-50. Epub 2005 Oct 11.

6.
7.

A bioinformatics knowledge discovery in text application for grid computing.

Castellano M, Mastronardi G, Bellotti R, Tarricone G.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S23. doi: 10.1186/1471-2105-10-S6-S23.

8.
9.

Windows .NET Network Distributed Basic Local Alignment Search Toolkit (W.ND-BLAST).

Dowd SE, Zaragoza J, Rodriguez JR, Oliver MJ, Payton PR.

BMC Bioinformatics. 2005 Apr 8;6:93.

10.

Alkahest NuclearBLAST : a user-friendly BLAST management and analysis system.

Diener SE, Houfek TD, Kalat SE, Windham DE, Burke M, Opperman C, Dean RA.

BMC Bioinformatics. 2005 Jun 15;6:147.

11.

Bioinformatics support for high-throughput proteomics.

Wilke A, Rückert C, Bartels D, Dondrup M, Goesmann A, Hüser AT, Kespohl S, Linke B, Mahne M, McHardy A, Pühler A, Meyer F.

J Biotechnol. 2003 Dec 19;106(2-3):147-56.

PMID:
14651857
12.

An agent-based multilayer architecture for bioinformatics grids.

Bartocci E, Cacciagrano D, Cannata N, Corradini F, Merelli E, Milanesi L, Romano P.

IEEE Trans Nanobioscience. 2007 Jun;6(2):142-8.

PMID:
17695749
13.

BioWMS: a web-based Workflow Management System for bioinformatics.

Bartocci E, Corradini F, Merelli E, Scortichini L.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S2.

14.

JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.

Latorre M, Silva H, Saba J, Guziolowski C, Vizoso P, Martinez V, Maldonado J, Morales A, Caroca R, Cambiazo V, Campos-Vargas R, Gonzalez M, Orellana A, Retamales J, Meisel LA.

BMC Bioinformatics. 2006 Nov 23;7:513.

15.

Evolution of web services in bioinformatics.

Neerincx PB, Leunissen JA.

Brief Bioinform. 2005 Jun;6(2):178-88. Review.

PMID:
15975226
16.

Developing a modern web interface for database-driven bioinformatics tools.

Khandheria P, Garner HR.

IEEE Eng Med Biol Mag. 2007 Mar-Apr;26(2):96-8. No abstract available.

PMID:
17441614
17.

TAMEE: data management and analysis for tissue microarrays.

Thallinger GG, Baumgartner K, Pirklbauer M, Uray M, Pauritsch E, Mehes G, Buck CR, Zatloukal K, Trajanoski Z.

BMC Bioinformatics. 2007 Mar 7;8:81.

18.

DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis.

Sherman BT, Huang da W, Tan Q, Guo Y, Bour S, Liu D, Stephens R, Baseler MW, Lane HC, Lempicki RA.

BMC Bioinformatics. 2007 Nov 2;8:426.

19.

BIAS: Bioinformatics Integrated Application Software.

Finak G, Godin N, Hallett M, Pepin F, Rajabi Z, Srivastava V, Tang Z.

Bioinformatics. 2005 Apr 15;21(8):1745-6. Epub 2004 Nov 30.

PMID:
15572471
20.

ESTPiper--a web-based analysis pipeline for expressed sequence tags.

Tang Z, Choi JH, Hemmerich C, Sarangi A, Colbourne JK, Dong Q.

BMC Genomics. 2009 Apr 21;10:174. doi: 10.1186/1471-2164-10-174.

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