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Items: 1 to 20 of 104

1.

COILCHECK: an interactive server for the analysis of interface regions in coiled coils.

Alva V, Syamala Devi DP, Sowdhamini R.

Protein Pept Lett. 2008;15(1):33-8.

PMID:
18221010
2.

Structural attributes for the recognition of weak and anomalous regions in coiled-coils of myosins and other motor proteins.

Sunitha MS, Nair AG, Charya A, Jadhav K, Mukhopadhyay S, Sowdhamini R.

BMC Res Notes. 2012 Sep 25;5:530. doi: 10.1186/1756-0500-5-530.

3.

Pharmacological interference with protein-protein interactions mediated by coiled-coil motifs.

Strauss HM, Keller S.

Handb Exp Pharmacol. 2008;(186):461-82. doi: 10.1007/978-3-540-72843-6_19. Review.

PMID:
18491064
4.

Assessing the integrity of designed homomeric parallel three-stranded coiled coils in the presence of metal ions.

Iranzo O, Ghosh D, Pecoraro VL.

Inorg Chem. 2006 Dec 11;45(25):9959-73.

PMID:
17140192
5.

SCRATCH: a protein structure and structural feature prediction server.

Cheng J, Randall AZ, Sweredoski MJ, Baldi P.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W72-6.

6.

The many types of interhelical ionic interactions in coiled coils - an overview.

Meier M, Stetefeld J, Burkhard P.

J Struct Biol. 2010 May;170(2):192-201. doi: 10.1016/j.jsb.2010.03.003. Epub 2010 Mar 6.

PMID:
20211731
8.

Characteristic features of amino acid residues in coiled-coil protein structures.

Gromiha MM, Parry DA.

Biophys Chem. 2004 Oct 1;111(2):95-103.

PMID:
15381307
9.

Statistical analysis of intrahelical ionic interactions in alpha-helices and coiled coils.

Meier M, Burkhard P.

J Struct Biol. 2006 Aug;155(2):116-29. Epub 2006 May 16.

PMID:
16876432
10.

CCHMM_PROF: a HMM-based coiled-coil predictor with evolutionary information.

Bartoli L, Fariselli P, Krogh A, Casadio R.

Bioinformatics. 2009 Nov 1;25(21):2757-63. doi: 10.1093/bioinformatics/btp539. Epub 2009 Sep 10.

PMID:
19744995
11.

Predicting coiled-coil regions in proteins.

Lupas A.

Curr Opin Struct Biol. 1997 Jun;7(3):388-93. Review.

PMID:
9204281
12.

Extended knobs-into-holes packing in classical and complex coiled-coil assemblies.

Walshaw J, Woolfson DN.

J Struct Biol. 2003 Dec;144(3):349-61.

PMID:
14643203
13.

A periodic table of coiled-coil protein structures.

Moutevelis E, Woolfson DN.

J Mol Biol. 2009 Jan 23;385(3):726-32. doi: 10.1016/j.jmb.2008.11.028. Epub 2008 Nov 25.

PMID:
19059267
14.

Coiled-coils: stability, specificity, and drug delivery potential.

Yu YB.

Adv Drug Deliv Rev. 2002 Oct 18;54(8):1113-29. Review.

PMID:
12384310
15.

MultiCoil: a program for predicting two- and three-stranded coiled coils.

Wolf E, Kim PS, Berger B.

Protein Sci. 1997 Jun;6(6):1179-89.

16.

A computationally guided protein-interaction screen uncovers coiled-coil interactions involved in vesicular trafficking.

Zhang H, Chen J, Wang Y, Peng L, Dong X, Lu Y, Keating AE, Jiang T.

J Mol Biol. 2009 Sep 11;392(1):228-41. doi: 10.1016/j.jmb.2009.07.006. Epub 2009 Jul 8.

PMID:
19591838
17.
18.

The FoldX web server: an online force field.

Schymkowitz J, Borg J, Stricher F, Nys R, Rousseau F, Serrano L.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W382-8.

19.

DSDBASE: a consortium of native and modelled disulphide bonds in proteins.

Vinayagam A, Pugalenthi G, Rajesh R, Sowdhamini R.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D200-2.

20.

Fifty years of coiled-coils and alpha-helical bundles: a close relationship between sequence and structure.

Parry DA, Fraser RD, Squire JM.

J Struct Biol. 2008 Sep;163(3):258-69. doi: 10.1016/j.jsb.2008.01.016. Epub 2008 Feb 8. Review.

PMID:
18342539

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