Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 138

1.

Optimal clone identifier for genomic shotgun libraries: "OC Identifier tool".

Cantão ME, Ferreira JE, Lemos EG.

Genet Mol Res. 2007 Oct 5;6(4):743-55.

2.

Construction and partial characterization of a Corynebacterium pseudotuberculosis bacterial artificial chromosome library through genomic survey sequencing.

Dorella FA, Fachin MS, Billault A, Dias Neto E, Soravito C, Oliveira SC, Meyer R, Miyoshi A, Azevedo V.

Genet Mol Res. 2006 Nov 30;5(4):653-63.

3.

Preselection of shotgun clones by oligonucleotide fingerprinting: an efficient and high throughput strategy to reduce redundancy in large-scale sequencing projects.

Radelof U, Hennig S, Seranski P, Steinfath M, Ramser J, Reinhardt R, Poustka A, Francis F, Lehrach H.

Nucleic Acids Res. 1998 Dec 1;26(23):5358-64.

4.
5.

MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands.

Ou HY, He X, Harrison EM, Kulasekara BR, Thani AB, Kadioglu A, Lory S, Hinton JC, Barer MR, Deng Z, Rajakumar K.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W97-W104. Epub 2007 May 30.

6.

The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.

Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A.

J Biotechnol. 2009 Mar 10;140(1-2):3-12.

PMID:
19297685
7.

Clone-array pooled shotgun mapping and sequencing: design and analysis of experiments.

Csürös M, Li B, Milosavljevic A.

Genome Inform. 2003;14:186-95.

PMID:
15706533
8.

A clone-array pooled shotgun strategy for sequencing large genomes.

Cai WW, Chen R, Gibbs RA, Bradley A.

Genome Res. 2001 Oct;11(10):1619-23.

9.

Amniote phylogenomics: testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale DNA sequences from reptiles.

Shedlock AM, Janes DE, Edwards SV.

Methods Mol Biol. 2008;422:91-117. doi: 10.1007/978-1-59745-581-7_7.

PMID:
18629663
10.

Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000 m vertical profile in the North Pacific Subtropical Gyre.

Pham VD, Konstantinidis KT, Palden T, DeLong EF.

Environ Microbiol. 2008 Sep;10(9):2313-30. doi: 10.1111/j.1462-2920.2008.01657.x. Epub 2008 May 20.

PMID:
18494796
11.

Using partial genomic fosmid libraries for sequencing complete organellar genomes.

McNeal JR, Leebens-Mack JH, Arumuganathan K, Kuehl JV, Boore JL, DePamphilis CW.

Biotechniques. 2006 Jul;41(1):69-73.

12.

Preparation of a phage DNA fragment library for whole genome shotgun sequencing.

Summer EJ.

Methods Mol Biol. 2009;502:27-46. doi: 10.1007/978-1-60327-565-1_4.

PMID:
19082550
13.

Bioinformatics: use in bacterial vaccine discovery.

Zagursky RJ, Russell D.

Biotechniques. 2001 Sep;31(3):636, 638, 640, passim. Review.

PMID:
11570507
14.
15.

SCALEs: multiscale analysis of library enrichment.

Lynch MD, Warnecke T, Gill RT.

Nat Methods. 2007 Jan;4(1):87-93. Epub 2006 Nov 12.

PMID:
17099705
16.

Shotgun sample sequence comparisons between mouse and human genomes.

Bouck JB, Metzker ML, Gibbs RA.

Nat Genet. 2000 May;25(1):31-3.

PMID:
10802652
17.

Using genomic microarrays to study insertional/transposon mutant libraries.

Baldwin DN, Salama NR.

Methods Enzymol. 2007;421:90-110. Review.

PMID:
17352918
18.

DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes.

Sebestyén E, Nagy T, Suhai S, Barta E.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S6. doi: 10.1186/1471-2105-10-S6-S6.

19.

A new set of bioinformatics tools for genome projects.

Almeida LG, Paixão R, Souza RC, Costa GC, Almeida DF, Vasconcelos AT.

Genet Mol Res. 2004 Mar 31;3(1):26-52.

20.

Automated FingerPrint Background removal: FPB.

Scalabrin S, Morgante M, Policriti A.

BMC Bioinformatics. 2009 Apr 30;10:127. doi: 10.1186/1471-2105-10-127.

Supplemental Content

Support Center