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Conversion of a replication origin to a silencer through a pathway shared by a Forkhead transcription factor and an S phase cyclin.

Casey L, Patterson EE, Müller U, Fox CA.

Mol Biol Cell. 2008 Feb;19(2):608-22. Epub 2007 Nov 28.


The Ku complex in silencing the cryptic mating-type loci of Saccharomyces cerevisiae.

Patterson EE, Fox CA.

Genetics. 2008 Oct;180(2):771-83. doi: 10.1534/genetics.108.091710. Epub 2008 Aug 20.


Fkh1 and Fkh2 bind multiple chromosomal elements in the S. cerevisiae genome with distinct specificities and cell cycle dynamics.

Ostrow AZ, Nellimoottil T, Knott SR, Fox CA, Tavaré S, Aparicio OM.

PLoS One. 2014 Feb 4;9(2):e87647. doi: 10.1371/journal.pone.0087647. eCollection 2014.


The origin recognition complex, SIR1, and the S phase requirement for silencing.

Fox CA, Ehrenhofer-Murray AE, Loo S, Rine J.

Science. 1997 Jun 6;276(5318):1547-51.


Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae.

Knott SR, Peace JM, Ostrow AZ, Gan Y, Rex AE, Viggiani CJ, Tavaré S, Aparicio OM.

Cell. 2012 Jan 20;148(1-2):99-111. doi: 10.1016/j.cell.2011.12.012.


A role for the Saccharomyces cerevisiae RENT complex protein Net1 in HMR silencing.

Kasulke D, Seitz S, Ehrenhofer-Murray AE.

Genetics. 2002 Aug;161(4):1411-23.


Design of a minimal silencer for the silent mating-type locus HML of Saccharomyces cerevisiae.

Weber JM, Ehrenhofer-Murray AE.

Nucleic Acids Res. 2010 Dec;38(22):7991-8000. doi: 10.1093/nar/gkq689. Epub 2010 Aug 10.


Recruitment of Fkh1 to replication origins requires precisely positioned Fkh1/2 binding sites and concurrent assembly of the pre-replicative complex.

Reinapae A, Jalakas K, Avvakumov N, Lõoke M, Kristjuhan K, Kristjuhan A.

PLoS Genet. 2017 Jan 31;13(1):e1006588. doi: 10.1371/journal.pgen.1006588. eCollection 2017 Jan.


Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase.

Peace JM, Villwock SK, Zeytounian JL, Gan Y, Aparicio OM.

Genome Res. 2016 Mar;26(3):365-75. doi: 10.1101/gr.196857.115. Epub 2016 Jan 4.


The origin recognition complex interacts with a subset of metabolic genes tightly linked to origins of replication.

Shor E, Warren CL, Tietjen J, Hou Z, Müller U, Alborelli I, Gohard FH, Yemm AI, Borisov L, Broach JR, Weinreich M, Nieduszynski CA, Ansari AZ, Fox CA.

PLoS Genet. 2009 Dec;5(12):e1000755. doi: 10.1371/journal.pgen.1000755. Epub 2009 Dec 4.


Functions of protosilencers in the formation and maintenance of heterochromatin in Saccharomyces cerevisiae.

Zhang X, Yu Q, Olsen L, Bi X.

PLoS One. 2012;7(5):e37092. doi: 10.1371/journal.pone.0037092. Epub 2012 May 17.


Evolution and Functional Trajectory of Sir1 in Gene Silencing.

Ellahi A, Rine J.

Mol Cell Biol. 2016 Jan 25;36(7):1164-79. doi: 10.1128/MCB.01013-15.


An auxiliary silencer and a boundary element maintain high levels of silencing proteins at HMR in Saccharomyces cerevisiae.

Lynch PJ, Rusche LN.

Genetics. 2010 May;185(1):113-27. doi: 10.1534/genetics.109.113100. Epub 2010 Feb 22.


Expanded roles of the origin recognition complex in the architecture and function of silenced chromatin in Saccharomyces cerevisiae.

Ozaydin B, Rine J.

Mol Cell Biol. 2010 Feb;30(3):626-39. doi: 10.1128/MCB.00614-09. Epub 2009 Nov 30.


Targeting of SIR1 protein establishes transcriptional silencing at HM loci and telomeres in yeast.

Chien CT, Buck S, Sternglanz R, Shore D.

Cell. 1993 Nov 5;75(3):531-41.


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