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Items: 1 to 20 of 193

1.

DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information.

Sierro N, Makita Y, de Hoon M, Nakai K.

Nucleic Acids Res. 2008 Jan;36(Database issue):D93-6. Epub 2007 Oct 25.

2.

DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics.

Makita Y, Nakao M, Ogasawara N, Nakai K.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D75-7.

3.

DBTBS: a database of Bacillus subtilis promoters and transcription factors.

Ishii T, Yoshida K, Terai G, Fujita Y, Nakai K.

Nucleic Acids Res. 2001 Jan 1;29(1):278-80.

4.

Inferring the transcriptional network of Bacillus subtilis.

Fadda A, Fierro AC, Lemmens K, Monsieurs P, Engelen K, Marchal K.

Mol Biosyst. 2009 Dec;5(12):1840-52. doi: 10.1039/b907310h. Epub 2009 Jul 28.

PMID:
20023724
5.

New insights into regulation of the tryptophan biosynthetic operon in Gram-positive bacteria.

Gutierrez-Preciado A, Jensen RA, Yanofsky C, Merino E.

Trends Genet. 2005 Aug;21(8):432-6.

PMID:
15953653
6.

Conservation of DNA regulatory motifs and discovery of new motifs in microbial genomes.

McGuire AM, Hughes JD, Church GM.

Genome Res. 2000 Jun;10(6):744-57.

7.

SwissRegulon: a database of genome-wide annotations of regulatory sites.

Pachkov M, Erb I, Molina N, van Nimwegen E.

Nucleic Acids Res. 2007 Jan;35(Database issue):D127-31. Epub 2006 Nov 27.

9.
10.

DBTGR: a database of tunicate promoters and their regulatory elements.

Sierro N, Kusakabe T, Park KJ, Yamashita R, Kinoshita K, Nakai K.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D552-5.

11.
12.

Ribosomal protein L20 controls expression of the Bacillus subtilis infC operon via a transcription attenuation mechanism.

Choonee N, Even S, Zig L, Putzer H.

Nucleic Acids Res. 2007;35(5):1578-88. Epub 2007 Feb 8.

13.

ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms.

Pareja E, Pareja-Tobes P, Manrique M, Pareja-Tobes E, Bonal J, Tobes R.

BMC Microbiol. 2006 Mar 15;6:29.

14.

Conservation of gene co-regulation between two prokaryotes: Bacillus subtilis and Escherichia coli.

Okuda S, Kawashima S, Goto S, Kanehisa M.

Genome Inform. 2005;16(1):116-24.

PMID:
16362913
15.

RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes.

Kazakov AE, Cipriano MJ, Novichkov PS, Minovitsky S, Vinogradov DV, Arkin A, Mironov AA, Gelfand MS, Dubchak I.

Nucleic Acids Res. 2007 Jan;35(Database issue):D407-12. Epub 2006 Nov 16.

16.

Predicting the operon structure of Bacillus subtilis using operon length, intergene distance, and gene expression information.

De Hoon MJ, Imoto S, Kobayashi K, Ogasawara N, Miyano S.

Pac Symp Biocomput. 2004:276-87.

17.

AthaMap: an online resource for in silico transcription factor binding sites in the Arabidopsis thaliana genome.

Steffens NO, Galuschka C, Schindler M, Bülow L, Hehl R.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D368-72.

18.

Transcription from the P3 promoter of the Bacillus subtilis spx gene is induced in response to disulfide stress.

Leelakriangsak M, Zuber P.

J Bacteriol. 2007 Mar;189(5):1727-35. Epub 2006 Dec 8.

19.

The entire organization of transcription units on the Bacillus subtilis genome.

Kobayashi H, Akitomi J, Fujii N, Kobayashi K, Altaf-Ul-Amin M, Kurokawa K, Ogasawara N, Kanaya S.

BMC Genomics. 2007 Jun 28;8:197.

20.

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