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Items: 1 to 20 of 100

1.

A second generation human haplotype map of over 3.1 million SNPs.

International HapMap Consortium, Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, Yang H, Zeng C, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, Pan H, Tang X, Wang J, Wang W, Yu J, Zhang B, Zhang Q, Zhao H, Zhao H, Zhou J, Gabriel SB, Barry R, Blumenstiel B, Camargo A, Defelice M, Faggart M, Goyette M, Gupta S, Moore J, Nguyen H, Onofrio RC, Parkin M, Roy J, Stahl E, Winchester E, Ziaugra L, Altshuler D, Shen Y, Yao Z, Huang W, Chu X, He Y, Jin L, Liu Y, Shen Y, Sun W, Wang H, Wang Y, Wang Y, Xiong X, Xu L, Waye MM, Tsui SK, Xue H, Wong JT, Galver LM, Fan JB, Gunderson K, Murray SS, Oliphant AR, Chee MS, Montpetit A, Chagnon F, Ferretti V, Leboeuf M, Olivier JF, Phillips MS, Roumy S, Sallée C, Verner A, Hudson TJ, Kwok PY, Cai D, Koboldt DC, Miller RD, Pawlikowska L, Taillon-Miller P, Xiao M, Tsui LC, Mak W, Song YQ, Tam PK, Nakamura Y, Kawaguchi T, Kitamoto T, Morizono T, Nagashima A, Ohnishi Y, Sekine A, Tanaka T, Tsunoda T, Deloukas P, Bird CP, Delgado M, Dermitzakis ET, Gwilliam R, Hunt S, Morrison J, Powell D, Stranger BE, Whittaker P, Bentley DR, Daly MJ, de Bakker PI, Barrett J, Chretien YR, Maller J, McCarroll S, Patterson N, Pe'er I, Price A, Purcell S, Richter DJ, Sabeti P, Saxena R, Schaffner SF, Sham PC, Varilly P, Altshuler D, Stein LD, Krishnan L, Smith AV, Tello-Ruiz MK, Thorisson GA, Chakravarti A, Chen PE, Cutler DJ, Kashuk CS, Lin S, Abecasis GR, Guan W, Li Y, Munro HM, Qin ZS, Thomas DJ, McVean G, Auton A, Bottolo L, Cardin N, Eyheramendy S, Freeman C, Marchini J, Myers S, Spencer C, Stephens M, Donnelly P, Cardon LR, Clarke G, Evans DM, Morris AP, Weir BS, Tsunoda T, Mullikin JC, Sherry ST, Feolo M, Skol A, Zhang H, Zeng C, Zhao H, Matsuda I, Fukushima Y, Macer DR, Suda E, Rotimi CN, Adebamowo CA, Ajayi I, Aniagwu T, Marshall PA, Nkwodimmah C, Royal CD, Leppert MF, Dixon M, Peiffer A, Qiu R, Kent A, Kato K, Niikawa N, Adewole IF, Knoppers BM, Foster MW, Clayton EW, Watkin J, Gibbs RA, Belmont JW, Muzny D, Nazareth L, Sodergren E, Weinstock GM, Wheeler DA, Yakub I, Gabriel SB, Onofrio RC, Richter DJ, Ziaugra L, Birren BW, Daly MJ, Altshuler D, Wilson RK, Fulton LL, Rogers J, Burton J, Carter NP, Clee CM, Griffiths M, Jones MC, McLay K, Plumb RW, Ross MT, Sims SK, Willey DL, Chen Z, Han H, Kang L, Godbout M, Wallenburg JC, L'Archevêque P, Bellemare G, Saeki K, Wang H, An D, Fu H, Li Q, Wang Z, Wang R, Holden AL, Brooks LD, McEwen JE, Guyer MS, Wang VO, Peterson JL, Shi M, Spiegel J, Sung LM, Zacharia LF, Collins FS, Kennedy K, Jamieson R, Stewart J.

Nature. 2007 Oct 18;449(7164):851-61.

2.

Similarity in recombination rate and linkage disequilibrium at CYP2C and CYP2D cytochrome P450 gene regions among Europeans indicates signs of selection and no advantage of using tagSNPs in population isolates.

Pimenoff VN, Laval G, Comas D, Palo JU, Gut I, Cann H, Excoffier L, Sajantila A.

Pharmacogenet Genomics. 2012 Dec;22(12):846-57. doi: 10.1097/FPC.0b013e32835a3a6d.

PMID:
23089684
3.

A haplotype map of the human genome.

International HapMap Consortium.

Nature. 2005 Oct 27;437(7063):1299-320.

4.

Haplotypes at ATM identify coding-sequence variation and indicate a region of extensive linkage disequilibrium.

Bonnen PE, Story MD, Ashorn CL, Buchholz TA, Weil MM, Nelson DL.

Am J Hum Genet. 2000 Dec;67(6):1437-51. Epub 2000 Nov 14.

5.

Transferability of tag SNPs to capture common genetic variation in DNA repair genes across multiple populations.

De Bakker PI, Graham RR, Altshuler D, Henderson BE, Haiman CA.

Pac Symp Biocomput. 2006:478-86.

6.

Single nucleotide polymorphisms in bone turnover-related genes in Koreans: ethnic differences in linkage disequilibrium and haplotype.

Kim KS, Kim GS, Hwang JY, Lee HJ, Park MH, Kim KJ, Jung J, Cha HS, Shin HD, Kang JH, Park EK, Kim TH, Hong JM, Koh JM, Oh B, Kimm K, Kim SY, Lee JY.

BMC Med Genet. 2007 Nov 26;8:70.

7.

DNA sequence variation in a 3.7-kb noncoding sequence 5' of the CYP1A2 gene: implications for human population history and natural selection.

Wooding SP, Watkins WS, Bamshad MJ, Dunn DM, Weiss RB, Jorde LB.

Am J Hum Genet. 2002 Sep;71(3):528-42. Epub 2002 Aug 9.

8.

Fine-scale recombination rate differences between sexes, populations and individuals.

Kong A, Thorleifsson G, Gudbjartsson DF, Masson G, Sigurdsson A, Jonasdottir A, Walters GB, Jonasdottir A, Gylfason A, Kristinsson KT, Gudjonsson SA, Frigge ML, Helgason A, Thorsteinsdottir U, Stefansson K.

Nature. 2010 Oct 28;467(7319):1099-103. doi: 10.1038/nature09525.

PMID:
20981099
9.

Tag SNP selection for Finnish individuals based on the CEPH Utah HapMap database.

Willer CJ, Scott LJ, Bonnycastle LL, Jackson AU, Chines P, Pruim R, Bark CW, Tsai YY, Pugh EW, Doheny KF, Kinnunen L, Mohlke KL, Valle TT, Bergman RN, Tuomilehto J, Collins FS, Boehnke M.

Genet Epidemiol. 2006 Feb;30(2):180-90.

10.

Haplotype and linkage disequilibrium architecture for human cancer-associated genes.

Bonnen PE, Wang PJ, Kimmel M, Chakraborty R, Nelson DL.

Genome Res. 2002 Dec;12(12):1846-53.

11.

Haplotype block structure and its applications to association studies: power and study designs.

Zhang K, Calabrese P, Nordborg M, Sun F.

Am J Hum Genet. 2002 Dec;71(6):1386-94. Epub 2002 Nov 18.

12.

Geographic and haplotype structure of candidate type 2 diabetes susceptibility variants at the calpain-10 locus.

Fullerton SM, Bartoszewicz A, Ybazeta G, Horikawa Y, Bell GI, Kidd KK, Cox NJ, Hudson RR, Di Rienzo A.

Am J Hum Genet. 2002 May;70(5):1096-106. Epub 2002 Mar 12.

13.

HapMap and mapping genes for cardiovascular disease.

Musunuru K, Kathiresan S.

Circ Cardiovasc Genet. 2008 Oct;1(1):66-71. doi: 10.1161/CIRCGENETICS.108.813675. Review.

14.

Worldwide distribution of the MYH9 kidney disease susceptibility alleles and haplotypes: evidence of historical selection in Africa.

Oleksyk TK, Nelson GW, An P, Kopp JB, Winkler CA.

PLoS One. 2010 Jul 9;5(7):e11474. doi: 10.1371/journal.pone.0011474.

15.

Linkage disequilibrium in the human genome.

Reich DE, Cargill M, Bolk S, Ireland J, Sabeti PC, Richter DJ, Lavery T, Kouyoumjian R, Farhadian SF, Ward R, Lander ES.

Nature. 2001 May 10;411(6834):199-204.

PMID:
11346797
16.

Nucleotide diversity and haplotype structure of the human angiotensinogen gene in two populations.

Nakajima T, Jorde LB, Ishigami T, Umemura S, Emi M, Lalouel JM, Inoue I.

Am J Hum Genet. 2002 Jan;70(1):108-23. Epub 2001 Nov 30.

17.

Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies.

Zhang K, Qin ZS, Liu JS, Chen T, Waterman MS, Sun F.

Genome Res. 2004 May;14(5):908-16. Epub 2004 Apr 12.

18.

SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines.

Ching A, Caldwell KS, Jung M, Dolan M, Smith OS, Tingey S, Morgante M, Rafalski AJ.

BMC Genet. 2002 Oct 7;3:19. Epub 2002 Oct 7.

19.

A genomic portrait of haplotype diversity and signatures of selection in indigenous southern African populations.

Chimusa ER, Meintjies A, Tchanga M, Mulder N, Seoighe C, Soodyall H, Ramesar R.

PLoS Genet. 2015 Mar 26;11(3):e1005052. doi: 10.1371/journal.pgen.1005052. eCollection 2015 Mar. Erratum in: PLoS Genet. 2015 Jul;11(7):e1005363. Seioghe, Cathal [corrected to Seoighe, Cathal].

20.

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