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Items: 1 to 20 of 99

1.

Hierarchies, multiple energy barriers, and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains.

Ackbarow T, Chen X, Keten S, Buehler MJ.

Proc Natl Acad Sci U S A. 2007 Oct 16;104(42):16410-5. Epub 2007 Oct 9.

2.

Energy landscape, structure and rate effects on strength properties of alpha-helical proteins.

Bertaud J, Hester J, Jimenez DD, Buehler MJ.

J Phys Condens Matter. 2010 Jan 27;22(3):035102. doi: 10.1088/0953-8984/22/3/035102. Epub 2009 Dec 21.

PMID:
21386278
3.

Alpha-helical protein domains unify strength and robustness through hierarchical nanostructures.

Ackbarow T, Buehler MJ.

Nanotechnology. 2009 Feb 18;20(7):075103. doi: 10.1088/0957-4484/20/7/075103. Epub 2009 Jan 23.

PMID:
19417407
4.

Nanomechanical properties of vimentin intermediate filament dimers.

Qin Z, Kreplak L, Buehler MJ.

Nanotechnology. 2009 Oct 21;20(42):425101. doi: 10.1088/0957-4484/20/42/425101. Epub 2009 Sep 25.

PMID:
19779230
5.
6.

Computer simulations and theory of protein translocation.

Makarov DE.

Acc Chem Res. 2009 Feb 17;42(2):281-9. doi: 10.1021/ar800128x.

PMID:
19072704
7.

Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments.

Ramm B, Stigler J, Hinczewski M, Thirumalai D, Herrmann H, Woehlke G, Rief M.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11359-64. doi: 10.1073/pnas.1403122111. Epub 2014 Jul 21.

8.

Strength limit of entropic elasticity in beta-sheet protein domains.

Keten S, Buehler MJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Dec;78(6 Pt 1):061913. Epub 2008 Dec 16.

PMID:
19256874
9.

Effects of turn stability and side-chain hydrophobicity on the folding of β-structures.

Shao Q, Wei H, Gao YQ.

J Mol Biol. 2010 Sep 24;402(3):595-609. doi: 10.1016/j.jmb.2010.08.037. Epub 2010 Sep 8.

PMID:
20804769
10.

Asymptotic strength limit of hydrogen-bond assemblies in proteins at vanishing pulling rates.

Keten S, Buehler MJ.

Phys Rev Lett. 2008 May 16;100(19):198301. Epub 2008 May 12.

PMID:
18518493
12.

Pulling geometry defines the mechanical resistance of a beta-sheet protein.

Brockwell DJ, Paci E, Zinober RC, Beddard GS, Olmsted PD, Smith DA, Perham RN, Radford SE.

Nat Struct Biol. 2003 Sep;10(9):731-7. Epub 2003 Aug 17. Erratum in: Nat Struct Biol. 2003 Oct;10(10):872.

PMID:
12923573
13.

Dissecting the structural determinants for the difference in mechanical stability of silk and amyloid beta-sheet stacks.

Xiao S, Xiao S, Gräter F.

Phys Chem Chem Phys. 2013 Jun 14;15(22):8765-71. doi: 10.1039/c3cp00067b. Epub 2013 Apr 30.

PMID:
23633029
14.

Mechanical energy transfer and dissipation in fibrous beta-sheet-rich proteins.

Xu Z, Buehler MJ.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jun;81(6 Pt 1):061910. Epub 2010 Jun 7.

PMID:
20866443
15.

Changing the mechanical unfolding pathway of FnIII10 by tuning the pulling strength.

Mitternacht S, Luccioli S, Torcini A, Imparato A, Irbäck A.

Biophys J. 2009 Jan;96(2):429-41. doi: 10.1016/j.bpj.2008.09.043.

16.

Multidimensional free energy surface of unfolding of HP-36: microscopic origin of ruggedness.

Ghosh R, Roy S, Bagchi B.

J Chem Phys. 2014 Oct 7;141(13):135101. doi: 10.1063/1.4896762.

PMID:
25296839
18.

Amyloid beta-protein monomer folding: free-energy surfaces reveal alloform-specific differences.

Yang M, Teplow DB.

J Mol Biol. 2008 Dec 12;384(2):450-64. doi: 10.1016/j.jmb.2008.09.039. Epub 2008 Sep 24.

19.
20.

Secondary structure and oligomerization behavior of equilibrium unfolding intermediates of the lambda cro repressor.

Fabian H, Fälber K, Gast K, Reinstädler D, Rogov VV, Naumann D, Zamyatkin DF, Filimonov VV.

Biochemistry. 1999 Apr 27;38(17):5633-42.

PMID:
10220352

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