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Items: 1 to 20 of 190

1.

Automatic prediction of protein interactions with large scale motion.

Schneidman-Duhovny D, Nussinov R, Wolfson HJ.

Proteins. 2007 Dec 1;69(4):764-73.

PMID:
17886339
2.

RosettaDock in CAPRI rounds 6-12.

Wang C, Schueler-Furman O, Andre I, London N, Fleishman SJ, Bradley P, Qian B, Baker D.

Proteins. 2007 Dec 1;69(4):758-63.

PMID:
17671979
3.
4.

ClusPro: performance in CAPRI rounds 6-11 and the new server.

Comeau SR, Kozakov D, Brenke R, Shen Y, Beglov D, Vajda S.

Proteins. 2007 Dec 1;69(4):781-5.

PMID:
17876812
5.

Docking without docking: ISEARCH--prediction of interactions using known interfaces.

Günther S, May P, Hoppe A, Frömmel C, Preissner R.

Proteins. 2007 Dec 1;69(4):839-44.

PMID:
17803236
6.

The targets of CAPRI rounds 6-12.

Janin J.

Proteins. 2007 Dec 1;69(4):699-703.

PMID:
17671980
7.

Classification of protein complexes based on docking difficulty.

Vajda S.

Proteins. 2005 Aug 1;60(2):176-80.

PMID:
15981248
8.

A holistic approach to protein docking.

Qin S, Zhou HX.

Proteins. 2007 Dec 1;69(4):743-9.

PMID:
17803232
9.

Docking and scoring protein complexes: CAPRI 3rd Edition.

Lensink MF, Méndez R, Wodak SJ.

Proteins. 2007 Dec 1;69(4):704-18.

PMID:
17918726
10.

Incorporating biochemical information and backbone flexibility in RosettaDock for CAPRI rounds 6-12.

Chaudhury S, Sircar A, Sivasubramanian A, Berrondo M, Gray JJ.

Proteins. 2007 Dec 1;69(4):793-800.

PMID:
17894347
11.

The performance of ZDOCK and ZRANK in rounds 6-11 of CAPRI.

Wiehe K, Pierce B, Tong WW, Hwang H, Mintseris J, Weng Z.

Proteins. 2007 Dec 1;69(4):719-25.

PMID:
17803212
12.

HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets.

de Vries SJ, van Dijk AD, Krzeminski M, van Dijk M, Thureau A, Hsu V, Wassenaar T, Bonvin AM.

Proteins. 2007 Dec 1;69(4):726-33.

PMID:
17803234
13.

HingeProt: automated prediction of hinges in protein structures.

Emekli U, Schneidman-Duhovny D, Wolfson HJ, Nussinov R, Haliloglu T.

Proteins. 2008 Mar;70(4):1219-27.

PMID:
17847101
15.

Implicit flexibility in protein docking: cross-docking and local refinement.

Król M, Chaleil RA, Tournier AL, Bates PA.

Proteins. 2007 Dec 1;69(4):750-7.

PMID:
17671977
16.

Protein-Protein Docking Benchmark 2.0: an update.

Mintseris J, Wiehe K, Pierce B, Anderson R, Chen R, Janin J, Weng Z.

Proteins. 2005 Aug 1;60(2):214-6.

PMID:
15981264
17.

DOCKGROUND system of databases for protein recognition studies: unbound structures for docking.

Gao Y, Douguet D, Tovchigrechko A, Vakser IA.

Proteins. 2007 Dec 1;69(4):845-51.

PMID:
17803215
18.

A filter enhanced sampling and combinatorial scoring study for protein docking in CAPRI.

Gong XQ, Chang S, Zhang QH, Li CH, Shen LZ, Ma XH, Wang MH, Liu B, He HQ, Chen WZ, Wang CX.

Proteins. 2007 Dec 1;69(4):859-65.

PMID:
17803223
19.

Geometry-based flexible and symmetric protein docking.

Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ.

Proteins. 2005 Aug 1;60(2):224-31.

PMID:
15981269
20.

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