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Items: 1 to 20 of 80

1.

Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.

Postier B, Didonato R Jr, Nevin KP, Liu A, Frank B, Lovley D, Methe BA.

J Microbiol Methods. 2008 Jul;74(1):26-32. Epub 2007 Jul 17.

PMID:
17720265
2.

Microarrays: the use of oligonucleotides and cDNA for the analysis of gene expression.

Barrett JC, Kawasaki ES.

Drug Discov Today. 2003 Feb 1;8(3):134-41. Review.

PMID:
12568783
3.

Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens.

Holmes DE, Chaudhuri SK, Nevin KP, Mehta T, Methé BA, Liu A, Ward JE, Woodard TL, Webster J, Lovley DR.

Environ Microbiol. 2006 Oct;8(10):1805-15.

PMID:
16958761
4.

Striptease on glass: validation of an improved stripping procedure for in situ microarrays.

Hahnke K, Jacobsen M, Gruetzkau A, Gruen JR, Koch M, Emoto M, Meyer TF, Walduck A, Kaufmann SH, Mollenkopf HJ.

J Biotechnol. 2007 Jan 30;128(1):1-13. Epub 2006 Sep 16.

PMID:
17084936
5.

Independence and reproducibility across microarray platforms.

Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J.

Nat Methods. 2005 May;2(5):337-44. Epub 2005 Apr 21.

6.

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Pedotti P, 't Hoen PA, Vreugdenhil E, Schenk GJ, Vossen RH, Ariyurek Y, de Hollander M, Kuiper R, van Ommen GJ, den Dunnen JT, Boer JM, de Menezes RX.

BMC Genomics. 2008 Mar 10;9:124. doi: 10.1186/1471-2164-9-124.

7.

Patient-based cross-platform comparison of oligonucleotide microarray expression profiles.

Schlingemann J, Habtemichael N, Ittrich C, Toedt G, Kramer H, Hambek M, Knecht R, Lichter P, Stauber R, Hahn M.

Lab Invest. 2005 Aug;85(8):1024-39.

8.

Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy.

Hu G, Llinás M, Li J, Preiser PR, Bozdech Z.

BMC Bioinformatics. 2007 Sep 19;8:350.

9.

Advances in spotted microarray resources for expression profiling.

Lyons P.

Brief Funct Genomic Proteomic. 2003 Apr;2(1):21-30. Review.

PMID:
15239940
10.

Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.

Strycharz SM, Glaven RH, Coppi MV, Gannon SM, Perpetua LA, Liu A, Nevin KP, Lovley DR.

Bioelectrochemistry. 2011 Feb;80(2):142-50. doi: 10.1016/j.bioelechem.2010.07.005. Epub 2010 Jul 23.

PMID:
20696622
11.

Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat.

Poole R, Barker G, Wilson ID, Coghill JA, Edwards KJ.

Funct Integr Genomics. 2007 Jul;7(3):207-19. Epub 2007 Mar 16.

PMID:
17364174
12.

Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms.

Borneman AR, Zhang ZD, Rozowsky J, Seringhaus MR, Gerstein M, Snyder M.

Funct Integr Genomics. 2007 Oct;7(4):335-45. Epub 2007 Jul 19.

PMID:
17638031
13.

Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.

Holmes DE, O'Neil RA, Chavan MA, N'Guessan LA, Vrionis HA, Perpetua LA, Larrahondo MJ, DiDonato R, Liu A, Lovley DR.

ISME J. 2009 Feb;3(2):216-30. doi: 10.1038/ismej.2008.89. Epub 2008 Oct 9.

PMID:
18843300
14.

Analysis of CD4+ T-cell gene expression in allergic subjects using two different microarray platforms.

Hansel NN, Cheadle C, Diette GB, Wright J, Thompson KM, Barnes KC, Georas SN.

Allergy. 2008 Mar;63(3):366-9. doi: 10.1111/j.1398-9995.2007.01540.x.

15.

Utilizing tiling microarrays for whole-genome analysis in plants.

Gregory BD, Yazaki J, Ecker JR.

Plant J. 2008 Feb;53(4):636-44. doi: 10.1111/j.1365-313X.2007.03320.x. Review.

16.

Assembly fabrication of oligonucleotide arrays.

Xiao P, Bu Y, Zhang X, Wu H, Zhou G, Lu Z.

J Nanosci Nanotechnol. 2005 Aug;5(8):1211-5.

PMID:
16193979
17.
18.

Focused microarrays as a method to evaluate subtle changes in gene expression.

Druyan S, de Oliveira JE, Ashwell CM.

Poult Sci. 2008 Nov;87(11):2418-29. doi: 10.3382/ps.2007-00513.

PMID:
18931196
19.

Integrated analysis of copy number alteration and RNA expression profiles of cancer using a high-resolution whole-genome oligonucleotide array.

Jung SH, Shin SH, Yim SH, Choi HS, Lee SH, Chung YJ.

Exp Mol Med. 2009 Jul 31;41(7):462-70. doi: 10.3858/emm.2009.41.7.051.

20.

Gene expression and isoform variation analysis using Affymetrix Exon Arrays.

Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.

BMC Genomics. 2008 Nov 7;9:529. doi: 10.1186/1471-2164-9-529. Erratum in: BMC Genomics. 2009 Mar 23;10. doi: 10.1186/1471-2164-10-121.

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