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Items: 1 to 20 of 105

1.

Physical and genetic structure of the maize genome reflects its complex evolutionary history.

Wei F, Coe E, Nelson W, Bharti AK, Engler F, Butler E, Kim H, Goicoechea JL, Chen M, Lee S, Fuks G, Sanchez-Villeda H, Schroeder S, Fang Z, McMullen M, Davis G, Bowers JE, Paterson AH, Schaeffer M, Gardiner J, Cone K, Messing J, Soderlund C, Wing RA.

PLoS Genet. 2007 Jul;3(7):e123.

2.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

3.

Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum.

Hass-Jacobus BL, Futrell-Griggs M, Abernathy B, Westerman R, Goicoechea JL, Stein J, Klein P, Hurwitz B, Zhou B, Rakhshan F, Sanyal A, Gill N, Lin JY, Walling JG, Luo MZ, Ammiraju JS, Kudrna D, Kim HR, Ware D, Wing RA, San Miguel P, Jackson SA.

BMC Genomics. 2006 Aug 8;7:199.

4.

New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome.

Salse J, Piégu B, Cooke R, Delseny M.

Plant J. 2004 May;38(3):396-409. Erratum in: Plant J. 2004 Jun;38(5):873.

5.

Evolution of DNA sequence nonhomologies among maize inbreds.

Brunner S, Fengler K, Morgante M, Tingey S, Rafalski A.

Plant Cell. 2005 Feb;17(2):343-60. Epub 2005 Jan 19.

6.

A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes.

Ilic K, SanMiguel PJ, Bennetzen JL.

Proc Natl Acad Sci U S A. 2003 Oct 14;100(21):12265-70. Epub 2003 Oct 6.

7.

Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids.

Wilson WA, Harrington SE, Woodman WL, Lee M, Sorrells ME, McCouch SR.

Genetics. 1999 Sep;153(1):453-73.

8.

Comparison of the starch synthesis genes between maize and rice: copies, chromosome location and expression divergence.

Yan HB, Pan XX, Jiang HW, Wu GJ.

Theor Appl Genet. 2009 Sep;119(5):815-25. doi: 10.1007/s00122-009-1091-5. Epub 2009 Jul 11.

PMID:
19593540
9.

A plant-transformation-competent BIBAC/BAC-based map of rice for functional analysis and genetic engineering of its genomic sequence.

Li Y, Uhm T, Ren C, Wu C, Santos TS, Lee MK, Yan B, Santos F, Zhang A, Scheuring C, Sanchez A, Millena AC, Nguyen HT, Kou H, Liu D, Zhang HB.

Genome. 2007 Mar;50(3):278-88.

PMID:
17502901
10.

The physical and genetic framework of the maize B73 genome.

Wei F, Zhang J, Zhou S, He R, Schaeffer M, Collura K, Kudrna D, Faga BP, Wissotski M, Golser W, Rock SM, Graves TA, Fulton RS, Coe E, Schnable PS, Schwartz DC, Ware D, Clifton SW, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000715. doi: 10.1371/journal.pgen.1000715. Epub 2009 Nov 20.

11.

Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum.

Swigonov√° Z, Bennetzen JL, Messing J.

Genetics. 2005 Feb;169(2):891-906. Epub 2004 Oct 16.

12.

DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes.

Ma J, SanMiguel P, Lai J, Messing J, Bennetzen JL.

Genetics. 2005 Jul;170(3):1209-20. Epub 2005 Apr 16.

13.

Organization of the prolamin gene family provides insight into the evolution of the maize genome and gene duplications in grass species.

Xu JH, Messing J.

Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14330-5. doi: 10.1073/pnas.0807026105. Epub 2008 Sep 15.

14.

Detailed analysis of a contiguous 22-Mb region of the maize genome.

Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, Nagel DH, Collura K, Kudrna D, Currie J, Lin J, Kim H, Angelova A, Scara G, Wissotski M, Golser W, Courtney L, Kruchowski S, Graves TA, Rock SM, Adams S, Fulton LA, Fronick C, Courtney W, Kramer M, Spiegel L, Nascimento L, Kalyanaraman A, Chaparro C, Deragon JM, Miguel PS, Jiang N, Wessler SR, Green PJ, Yu Y, Schwartz DC, Meyers BC, Bennetzen JL, Martienssen RA, McCombie WR, Aluru S, Clifton SW, Schnable PS, Ware D, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000728. doi: 10.1371/journal.pgen.1000728. Epub 2009 Nov 20.

16.
17.

Mapping of genome-wide resistance gene analogs (RGAs) in maize (Zea mays L.).

Xiao W, Zhao J, Fan S, Li L, Dai J, Xu M.

Theor Appl Genet. 2007 Aug;115(4):501-8. Epub 2007 Jun 21.

PMID:
17581735
18.

Uneven chromosome contraction and expansion in the maize genome.

Bruggmann R, Bharti AK, Gundlach H, Lai J, Young S, Pontaroli AC, Wei F, Haberer G, Fuks G, Du C, Raymond C, Estep MC, Liu R, Bennetzen JL, Chan AP, Rabinowicz PD, Quackenbush J, Barbazuk WB, Wing RA, Birren B, Nusbaum C, Rounsley S, Mayer KF, Messing J.

Genome Res. 2006 Oct;16(10):1241-51. Epub 2006 Aug 10.

19.
20.

An integrated physical and genetic map of the rice genome.

Chen M, Presting G, Barbazuk WB, Goicoechea JL, Blackmon B, Fang G, Kim H, Frisch D, Yu Y, Sun S, Higingbottom S, Phimphilai J, Phimphilai D, Thurmond S, Gaudette B, Li P, Liu J, Hatfield J, Main D, Farrar K, Henderson C, Barnett L, Costa R, Williams B, Walser S, Atkins M, Hall C, Budiman MA, Tomkins JP, Luo M, Bancroft I, Salse J, Regad F, Mohapatra T, Singh NK, Tyagi AK, Soderlund C, Dean RA, Wing RA.

Plant Cell. 2002 Mar;14(3):537-45.

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