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Items: 1 to 20 of 139

1.

Using Grid technology for computationally intensive applied bioinformatics analyses.

Andrade J, Berglund L, Uhlén M, Odeberg J.

In Silico Biol. 2006;6(6):495-504.

PMID:
17518760
2.

The use of grid computing to drive data-intensive genetic research.

Andrade J, Andersen M, Sillén A, Graff C, Odeberg J.

Eur J Hum Genet. 2007 Jun;15(6):694-702. Epub 2007 Mar 21.

3.

Distributed sequence alignment applications for the public computing architecture.

Pellicer S, Chen G, Chan KC, Pan Y.

IEEE Trans Nanobioscience. 2008 Mar;7(1):35-43. doi: 10.1109/TNB.2008.2000148.

PMID:
18334454
4.

NBLAST: a cluster variant of BLAST for NxN comparisons.

Dumontier M, Hogue CW.

BMC Bioinformatics. 2002 May 8;3:13.

5.

Squid - a simple bioinformatics grid.

Carvalho PC, Glória RV, de Miranda AB, Degrave WM.

BMC Bioinformatics. 2005 Aug 3;6:197.

6.

PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.

Saebø PE, Andersen SM, Myrseth J, Laerdahl JK, Rognes T.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W535-9.

7.

High performance GRID based implementation for genomics and protein analysis.

Milanesi L, Merelli I.

Stud Health Technol Inform. 2006;120:374-80.

PMID:
16823155
8.

A bioinformatics knowledge discovery in text application for grid computing.

Castellano M, Mastronardi G, Bellotti R, Tarricone G.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S23. doi: 10.1186/1471-2105-10-S6-S23.

9.

PCHM: A bioinformatic resource for high-throughput human mitochondrial proteome searching and comparison.

Kim T, Kim E, Park SJ, Joo H.

Comput Biol Med. 2009 Aug;39(8):689-96. doi: 10.1016/j.compbiomed.2009.05.006. Epub 2009 Jun 21.

PMID:
19541297
10.

CBESW: sequence alignment on the Playstation 3.

Wirawan A, Kwoh CK, Hieu NT, Schmidt B.

BMC Bioinformatics. 2008 Sep 17;9:377. doi: 10.1186/1471-2105-9-377.

11.

A services oriented system for bioinformatics applications on the grid.

Aloisio G, Cafaro M, Epicoco I, Fiore S, Mirto M.

Stud Health Technol Inform. 2007;126:174-83.

PMID:
17476060
12.

ProGenGrid: a grid-enabled platform for bioinformatics.

Aloisio G, Cafaro M, Fiore S, Mirto M.

Stud Health Technol Inform. 2005;112:113-26.

PMID:
15923721
13.

Parallelisation of the blast algorithm.

Qi Y, Lin F.

Cell Mol Biol Lett. 2005;10(2):281-5.

14.

A highly optimized grid deployment: the metagenomic analysis example.

Aparicio G, Blanquer I, Hernández V.

Stud Health Technol Inform. 2008;138:105-15.

PMID:
18560112
15.

BGBlast: a BLAST grid implementation with database self-updating and adaptive replication.

Trombetti GA, Merelli I, Orro A, Milanesi L.

Stud Health Technol Inform. 2007;126:23-30.

PMID:
17476044
16.

Identifying remote protein homologs by network propagation.

Noble WS, Kuang R, Leslie C, Weston J.

FEBS J. 2005 Oct;272(20):5119-28. Review.

17.

On the parallelisation of bioinformatics applications.

Trelles O.

Brief Bioinform. 2001 May;2(2):181-94.

PMID:
11465735
18.

Global computing for bioinformatics.

Loewe L.

Brief Bioinform. 2002 Dec;3(4):377-88. Review.

PMID:
12511066
19.

BAAQ: an infrastructure for application integration and knowledge discovery in bioinformatics.

Gong X, Nakamura K, Yu H, Yura K, Go N.

IEEE Trans Inf Technol Biomed. 2007 Jul;11(4):428-34.

PMID:
17674625
20.

High-throughput bioinformatics with the Cyrille2 pipeline system.

Fiers MW, van der Burgt A, Datema E, de Groot JC, van Ham RC.

BMC Bioinformatics. 2008 Feb 12;9:96. doi: 10.1186/1471-2105-9-96.

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