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Items: 1 to 20 of 96

1.

Allele-specific chromatin immunoprecipitation studies show genetic influence on chromatin state in human genome.

Kadota M, Yang HH, Hu N, Wang C, Hu Y, Taylor PR, Buetow KH, Lee MP.

PLoS Genet. 2007 May 18;3(5):e81.

3.

Interrogation of allelic chromatin states in human cells by high-density ChIP-genotyping.

Light N, Adoue V, Ge B, Chen SH, Kwan T, Pastinen T.

Epigenetics. 2014 Sep;9(9):1238-51. doi: 10.4161/epi.29920. Epub 2014 Jul 23.

4.

Integration of cap analysis of gene expression and chromatin immunoprecipitation analysis on array reveals genome-wide androgen receptor signaling in prostate cancer cells.

Takayama K, Tsutsumi S, Katayama S, Okayama T, Horie-Inoue K, Ikeda K, Urano T, Kawazu C, Hasegawa A, Ikeo K, Gojyobori T, Ouchi Y, Hayashizaki Y, Aburatani H, Inoue S.

Oncogene. 2011 Feb 3;30(5):619-30. doi: 10.1038/onc.2010.436. Epub 2010 Oct 4.

PMID:
20890304
5.

Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.

Hitchler MJ, Rice JC.

Methods Mol Biol. 2011;767:253-67. doi: 10.1007/978-1-61779-201-4_19.

PMID:
21822881
6.

Quantitative assessment of chromatin immunoprecipitation grade antibodies directed against histone modifications reveals patterns of co-occurring marks on histone protein molecules.

Peach SE, Rudomin EL, Udeshi ND, Carr SA, Jaffe JD.

Mol Cell Proteomics. 2012 May;11(5):128-37. doi: 10.1074/mcp.M111.015941. Epub 2012 Mar 21.

7.

Chromatin modifications induced by PML-RARalpha repress critical targets in leukemogenesis as analyzed by ChIP-Chip.

Hoemme C, Peerzada A, Behre G, Wang Y, McClelland M, Nieselt K, Zschunke M, Disselhoff C, Agrawal S, Isken F, Tidow N, Berdel WE, Serve H, Müller-Tidow C.

Blood. 2008 Mar 1;111(5):2887-95. Epub 2007 Nov 16.

8.

Comprehensive epigenetic analysis using oral rinse samples: a pilot study.

Kusumoto T, Hamada T, Yamada N, Nagata S, Kanmura Y, Houjou I, Kamikawa Y, Yonezawa S, Sugihara K.

J Oral Maxillofac Surg. 2012 Jun;70(6):1486-94. doi: 10.1016/j.joms.2011.04.021. Epub 2011 Aug 6.

PMID:
21821326
9.

Myc-binding-site recognition in the human genome is determined by chromatin context.

Guccione E, Martinato F, Finocchiaro G, Luzi L, Tizzoni L, Dall' Olio V, Zardo G, Nervi C, Bernard L, Amati B.

Nat Cell Biol. 2006 Jul;8(7):764-70. Epub 2006 Jun 11.

PMID:
16767079
10.

Clustered ChIP-Seq-defined transcription factor binding sites and histone modifications map distinct classes of regulatory elements.

Rye M, Sætrom P, Håndstad T, Drabløs F.

BMC Biol. 2011 Nov 24;9:80. doi: 10.1186/1741-7007-9-80.

11.

Developmental origins of disease and determinants of chromatin structure: maternal diet modifies the primate fetal epigenome.

Aagaard-Tillery KM, Grove K, Bishop J, Ke X, Fu Q, McKnight R, Lane RH.

J Mol Endocrinol. 2008 Aug;41(2):91-102. doi: 10.1677/JME-08-0025. Epub 2008 May 30.

13.

Spatio-temporal activation of chromatin on the human CYP24 gene promoter in the presence of 1alpha,25-Dihydroxyvitamin D3.

Väisänen S, Dunlop TW, Sinkkonen L, Frank C, Carlberg C.

J Mol Biol. 2005 Jul 1;350(1):65-77.

PMID:
15919092
14.

Histone H3 lysine 4 monomethylation (H3K4me1) and H3 lysine 9 monomethylation (H3K9me1): distribution and their association in regulating gene expression under hyperglycaemic/hyperinsulinemic conditions in 3T3 cells.

Gupta J, Kumar S, Li J, Krishna Murthy Karuturi R, Tikoo K.

Biochimie. 2012 Dec;94(12):2656-64. doi: 10.1016/j.biochi.2012.08.011. Epub 2012 Aug 21.

PMID:
22951486
15.

High-resolution genome-wide mapping of histone modifications.

Roh TY, Ngau WC, Cui K, Landsman D, Zhao K.

Nat Biotechnol. 2004 Aug;22(8):1013-6. Epub 2004 Jul 4.

PMID:
15235610
16.

Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns.

Kratz A, Arner E, Saito R, Kubosaki A, Kawai J, Suzuki H, Carninci P, Arakawa T, Tomita M, Hayashizaki Y, Daub CO.

BMC Genomics. 2010 Apr 21;11:257. doi: 10.1186/1471-2164-11-257.

17.

Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance.

Baker K, Dhillon T, Colas I, Cook N, Milne I, Milne L, Bayer M, Flavell AJ.

Plant J. 2015 Oct;84(1):111-24. doi: 10.1111/tpj.12963. Epub 2015 Sep 9.

18.

Allele specific analysis of the ADRBK2 gene in lymphoblastoid cells from bipolar disorder patients.

McCarthy MJ, Barrett TB, Nissen S, Kelsoe JR, Turner EE.

J Psychiatr Res. 2010 Mar;44(4):201-8. doi: 10.1016/j.jpsychires.2009.08.010. Epub 2009 Sep 18.

19.

Global mapping of H3K4me1 and H3K4me3 reveals the chromatin state-based cell type-specific gene regulation in human Treg cells.

Tian Y, Jia Z, Wang J, Huang Z, Tang J, Zheng Y, Tang Y, Wang Q, Tian Z, Yang D, Zhang Y, Fu X, Song J, Liu S, van Velkinburgh JC, Wu Y, Ni B.

PLoS One. 2011;6(11):e27770. doi: 10.1371/journal.pone.0027770. Epub 2011 Nov 23.

20.

Chromatin immunoprecipitation protocol for histone modifications and protein-DNA binding analyses in Arabidopsis.

Pien S, Grossniklaus U.

Methods Mol Biol. 2010;631:209-20. doi: 10.1007/978-1-60761-646-7_15.

PMID:
20204877

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