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Items: 1 to 20 of 109

1.

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.

Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J.

Genome Res. 2007 Jul;17(7):992-1004. Epub 2007 May 10.

2.

Functional noncoding sequences derived from SINEs in the mammalian genome.

Nishihara H, Smit AF, Okada N.

Genome Res. 2006 Jul;16(7):864-74. Epub 2006 May 22.

3.

Sauria SINEs: Novel short interspersed retroposable elements that are widespread in reptile genomes.

Piskurek O, Austin CC, Okada N.

J Mol Evol. 2006 May;62(5):630-44. Epub 2006 Apr 11.

PMID:
16612539
4.

The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis.

Piskurek O, Nishihara H, Okada N.

Gene. 2009 Jul 15;441(1-2):111-8. doi: 10.1016/j.gene.2008.11.030. Epub 2008 Dec 14.

PMID:
19118606
5.

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences.

Mikkelsen TS, Wakefield MJ, Aken B, Amemiya CT, Chang JL, Duke S, Garber M, Gentles AJ, Goodstadt L, Heger A, Jurka J, Kamal M, Mauceli E, Searle SM, Sharpe T, Baker ML, Batzer MA, Benos PV, Belov K, Clamp M, Cook A, Cuff J, Das R, Davidow L, Deakin JE, Fazzari MJ, Glass JL, Grabherr M, Greally JM, Gu W, Hore TA, Huttley GA, Kleber M, Jirtle RL, Koina E, Lee JT, Mahony S, Marra MA, Miller RD, Nicholls RD, Oda M, Papenfuss AT, Parra ZE, Pollock DD, Ray DA, Schein JE, Speed TP, Thompson K, VandeBerg JL, Wade CM, Walker JA, Waters PD, Webber C, Weidman JR, Xie X, Zody MC; Broad Institute Genome Sequencing Platform; Broad Institute Whole Genome Assembly Team, Graves JA, Ponting CP, Breen M, Samollow PB, Lander ES, Lindblad-Toh K.

Nature. 2007 May 10;447(7141):167-77.

PMID:
17495919
6.

An X chromosome microRNA cluster in the marsupial species Monodelphis domestica.

Devor EJ, Huang L, Wise A, Peek AS, Samollow PB.

J Hered. 2011 Sep-Oct;102(5):577-83. doi: 10.1093/jhered/esr050. Epub 2011 Jun 17.

7.

CORE-SINEs: eukaryotic short interspersed retroposing elements with common sequence motifs.

Gilbert N, Labuda D.

Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2869-74.

9.
10.

Evolutionary active transposable elements in the genome of the coelacanth.

Chalopin D, Fan S, Simakov O, Meyer A, Schartl M, Volff JN.

J Exp Zool B Mol Dev Evol. 2014 Sep;322(6):322-33. doi: 10.1002/jez.b.22521. Epub 2013 Aug 1.

PMID:
23908136
11.

Characterization of the opossum immune genome provides insights into the evolution of the mammalian immune system.

Belov K, Sanderson CE, Deakin JE, Wong ES, Assange D, McColl KA, Gout A, de Bono B, Barrow AD, Speed TP, Trowsdale J, Papenfuss AT.

Genome Res. 2007 Jul;17(7):982-91. Epub 2007 May 10.

12.
13.

SINEs, evolution and genome structure in the opossum.

Gu W, Ray DA, Walker JA, Barnes EW, Gentles AJ, Samollow PB, Jurka J, Batzer MA, Pollock DD.

Gene. 2007 Jul 1;396(1):46-58. Epub 2007 Mar 19.

PMID:
17442506
14.

Tracking the past: interspersed repeats in an extinct Afrotherian mammal, Mammuthus primigenius.

Zhao F, Qi J, Schuster SC.

Genome Res. 2009 Aug;19(8):1384-92. doi: 10.1101/gr.091363.109. Epub 2009 Jun 9.

15.

Conserved domains and SINE diversity during animal evolution.

Luchetti A, Mantovani B.

Genomics. 2013 Oct;102(4):296-300. doi: 10.1016/j.ygeno.2013.08.005. Epub 2013 Aug 24.

PMID:
23981965
16.

Integrated cytogenetic BAC map of the genome of the gray, short-tailed opossum, Monodelphis domestica.

Duke SE, Samollow PB, Mauceli E, Lindblad-Toh K, Breen M.

Chromosome Res. 2007;15(3):361-70. Epub 2007 May 10.

PMID:
17406991
17.

A VpreB3 homologue in a marsupial, the gray short-tailed opossum, Monodelphis domestica.

Wang X, Parra ZE, Miller RD.

Immunogenetics. 2012 Aug;64(8):647-52. doi: 10.1007/s00251-012-0626-0. Epub 2012 Jun 9.

18.

Evolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devil.

Gallus S, Hallström BM, Kumar V, Dodt WG, Janke A, Schumann GG, Nilsson MA.

Mol Biol Evol. 2015 May;32(5):1268-83. doi: 10.1093/molbev/msv017. Epub 2015 Jan 28.

19.

Bov-B-mobilized SINEs in vertebrate genomes.

Gogolevsky KP, Vassetzky NS, Kramerov DA.

Gene. 2008 Jan 15;407(1-2):75-85. Epub 2007 Oct 5.

PMID:
17976929
20.

Convergent and divergent evolution of genomic imprinting in the marsupial Monodelphis domestica.

Das R, Anderson N, Koran MI, Weidman JR, Mikkelsen TS, Kamal M, Murphy SK, Linblad-Toh K, Greally JM, Jirtle RL.

BMC Genomics. 2012 Aug 16;13:394. doi: 10.1186/1471-2164-13-394.

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