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Items: 1 to 20 of 130

1.

Assessing the reliability of eBURST using simulated populations with known ancestry.

Turner KM, Hanage WP, Fraser C, Connor TR, Spratt BG.

BMC Microbiol. 2007 Apr 12;7:30.

2.

Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach.

Francisco AP, Bugalho M, Ramirez M, Carriço JA.

BMC Bioinformatics. 2009 May 18;10:152. doi: 10.1186/1471-2105-10-152.

3.

Displaying the relatedness among isolates of bacterial species -- the eBURST approach.

Spratt BG, Hanage WP, Li B, Aanensen DM, Feil EJ.

FEMS Microbiol Lett. 2004 Dec 15;241(2):129-34.

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Lineage specific recombination rates and microevolution in Listeria monocytogenes.

den Bakker HC, Didelot X, Fortes ED, Nightingale KK, Wiedmann M.

BMC Evol Biol. 2008 Oct 8;8:277. doi: 10.1186/1471-2148-8-277.

8.

Investigating Burkholderia cepacia complex populations recovered from Italian maize rhizosphere by multilocus sequence typing.

Dalmastri C, Baldwin A, Tabacchioni S, Bevivino A, Mahenthiralingam E, Chiarini L, Dowson C.

Environ Microbiol. 2007 Jul;9(7):1632-9.

PMID:
17564598
9.

Restricted gene flow among hospital subpopulations of Enterococcus faecium.

Willems RJ, Top J, van Schaik W, Leavis H, Bonten M, Sirén J, Hanage WP, Corander J.

MBio. 2012 Jul 17;3(4):e00151-12. doi: 10.1128/mBio.00151-12.

10.

Comparative genomic assessment of Multi-Locus Sequence Typing: rapid accumulation of genomic heterogeneity among clonal isolates of Campylobacter jejuni.

Taboada EN, Mackinnon JM, Luebbert CC, Gannon VP, Nash JH, Rahn K.

BMC Evol Biol. 2008 Aug 8;8:229. doi: 10.1186/1471-2148-8-229.

11.

Typing of vancomycin-resistant Enterococcus faecium strains in a cohort of patients in an Italian intensive care Unit.

Lambiase A, Del Pezzo M, Piazza O, Petagna C, De Luca C, Rossano F.

Infection. 2007 Dec;35(6):428-33.

PMID:
18034209
12.

Diversity of the parB and repA genes of the Burkholderia cepacia complex and their utility for rapid identification of Burkholderia cenocepacia.

Drevinek P, Baldwin A, Dowson CG, Mahenthiralingam E.

BMC Microbiol. 2008 Mar 7;8:44. doi: 10.1186/1471-2180-8-44.

13.

Genomic patterns of recombination, clonal divergence and environment in marine microbial populations.

Konstantinidis KT, DeLong EF.

ISME J. 2008 Oct;2(10):1052-65. doi: 10.1038/ismej.2008.62.

PMID:
18580971
14.

Exploring the concept of clonality in bacteria.

Spratt BG.

Methods Mol Biol. 2004;266:323-52. Review.

PMID:
15148426
15.

Evolutionary relationships between sporadic and epidemic strains of healthcare-associated methicillin-resistant Staphylococcus aureus.

Hallin M, Denis O, Deplano A, De Ryck R, Crèvecoeur S, Rottiers S, de Mendonça R, Struelens MJ.

Clin Microbiol Infect. 2008 Jul;14(7):659-69. doi: 10.1111/j.1469-0691.2008.02015.x.

16.

Inference of bacterial microevolution using multilocus sequence data.

Didelot X, Falush D.

Genetics. 2007 Mar;175(3):1251-66.

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Inferring recruitment history from spatial genetic structure within populations of the colonizing tree Albizia julibrissin (Fabaceae).

Pardini EA, Hamrick JL.

Mol Ecol. 2008 Jun;17(12):2865-79. doi: 10.1111/j.1365-294X.2008.03807.x.

PMID:
18510586
19.

Classification and identification of bacteria by mass spectrometry and computational analysis.

Sauer S, Freiwald A, Maier T, Kube M, Reinhardt R, Kostrzewa M, Geider K.

PLoS One. 2008 Jul 30;3(7):e2843. doi: 10.1371/journal.pone.0002843.

20.

Population structure of invasive and colonizing strains of Streptococcus agalactiae from neonates of six U.S. Academic Centers from 1995 to 1999.

Bohnsack JF, Whiting A, Gottschalk M, Dunn DM, Weiss R, Azimi PH, Philips JB 3rd, Weisman LE, Rhoads GG, Lin FY.

J Clin Microbiol. 2008 Apr;46(4):1285-91. doi: 10.1128/JCM.02105-07.

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