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Items: 1 to 20 of 126

1.

Prediction of phenotype and gene expression for combinations of mutations.

Carter GW, Prinz S, Neou C, Shelby JP, Marzolf B, Thorsson V, Galitski T.

Mol Syst Biol. 2007;3:96. Epub 2007 Mar 27.

2.

A pharmaco-epistasis strategy reveals a new cell size controlling pathway in yeast.

Moretto F, Sagot I, Daignan-Fornier B, Pinson B.

Mol Syst Biol. 2013 Nov 12;9:707. doi: 10.1038/msb.2013.60.

3.

Transcriptional regulatory networks in Saccharomyces cerevisiae.

Lee TI, Rinaldi NJ, Robert F, Odom DT, Bar-Joseph Z, Gerber GK, Hannett NM, Harbison CT, Thompson CM, Simon I, Zeitlinger J, Jennings EG, Murray HL, Gordon DB, Ren B, Wyrick JJ, Tagne JB, Volkert TL, Fraenkel E, Gifford DK, Young RA.

Science. 2002 Oct 25;298(5594):799-804.

4.
5.

Predicting the effects of copy-number variation in double and triple mutant combinations.

Carter GW, Hays M, Li S, Galitski T.

Pac Symp Biocomput. 2012:19-30.

6.

Multiple genetic interaction experiments provide complementary information useful for gene function prediction.

Michaut M, Bader GD.

PLoS Comput Biol. 2012;8(6):e1002559. doi: 10.1371/journal.pcbi.1002559. Epub 2012 Jun 21.

7.

Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae.

Herrgård MJ, Lee BS, Portnoy V, Palsson BØ.

Genome Res. 2006 May;16(5):627-35. Epub 2006 Apr 10.

8.

Systematic identification of pathways that couple cell growth and division in yeast.

Jorgensen P, Nishikawa JL, Breitkreutz BJ, Tyers M.

Science. 2002 Jul 19;297(5580):395-400. Epub 2002 Jun 27.

9.

Exploring genetic interactions and networks with yeast.

Boone C, Bussey H, Andrews BJ.

Nat Rev Genet. 2007 Jun;8(6):437-49. Review.

PMID:
17510664
11.

Combination of genomic approaches with functional genetic experiments reveals two modes of repression of yeast middle-phase meiosis genes.

Klutstein M, Siegfried Z, Gispan A, Farkash-Amar S, Zinman G, Bar-Joseph Z, Simchen G, Simon I.

BMC Genomics. 2010 Aug 17;11:478. doi: 10.1186/1471-2164-11-478.

12.

Computational discovery of gene modules and regulatory networks.

Bar-Joseph Z, Gerber GK, Lee TI, Rinaldi NJ, Yoo JY, Robert F, Gordon DB, Fraenkel E, Jaakkola TS, Young RA, Gifford DK.

Nat Biotechnol. 2003 Nov;21(11):1337-42. Epub 2003 Oct 12.

13.

Control of yeast filamentous-form growth by modules in an integrated molecular network.

Prinz S, Avila-Campillo I, Aldridge C, Srinivasan A, Dimitrov K, Siegel AF, Galitski T.

Genome Res. 2004 Mar;14(3):380-90.

14.

A regulatory network analysis of phenotypic plasticity in yeast.

Promislow D.

Am Nat. 2005 May;165(5):515-23. Epub 2005 Feb 18.

PMID:
15795849
15.

Intragenic suppression of Gal3C interaction with Gal80 in the Saccharomyces cerevisiae GAL gene switch.

Diep CQ, Peng G, Bewley M, Pilauri V, Ropson I, Hopper JE.

Genetics. 2006 Jan;172(1):77-87. Epub 2005 Oct 11.

16.

Epistasis in a quantitative trait captured by a molecular model of transcription factor interactions.

Gertz J, Gerke JP, Cohen BA.

Theor Popul Biol. 2010 Feb;77(1):1-5. doi: 10.1016/j.tpb.2009.10.002. Epub 2009 Oct 8.

17.

Identifying genetic modulators of the connectivity between transcription factors and their transcriptional targets.

Fazlollahi M, Muroff I, Lee E, Causton HC, Bussemaker HJ.

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1835-43. doi: 10.1073/pnas.1517140113. Epub 2016 Mar 10.

18.

Gene function prediction from congruent synthetic lethal interactions in yeast.

Ye P, Peyser BD, Pan X, Boeke JD, Spencer FA, Bader JS.

Mol Syst Biol. 2005;1:2005.0026. Epub 2005 Nov 22.

19.

Transcriptional regulatory network shapes the genome structure of Saccharomyces cerevisiae.

Li S, Heermann DW.

Nucleus. 2013 May-Jun;4(3):216-28. doi: 10.4161/nucl.24875. Epub 2013 May 1.

20.

Multifunctional genes.

van de Peppel J, Holstege FC.

Mol Syst Biol. 2005;1:2005.0003. Epub 2005 Mar 29. No abstract available.

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