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Evolution of mitochondrial SSU-rDNA variable domain sequences and rRNA secondary structures, and phylogeny of the Agrocybe aegerita multispecies complex.

Uhart M, Sirand-Pugnet P, Labarère J. Uhart M, et al. Res Microbiol. 2007 Apr;158(3):203-12. doi: 10.1016/j.resmic.2006.12.009. Epub 2007 Jan 19. Res Microbiol. 2007. PMID: 17346935 Free article.

Molecular evolution of mitochondrial ribosomal DNA in the fungal genus Tricholoma: barcoding implications.

Mouhamadou B, Carriconde F, Gryta H, Jargeat P, Manzi S, Gardes M. Mouhamadou B, et al. Fungal Genet Biol. 2008 Sep;45(9):1219-26. doi: 10.1016/j.fgb.2008.06.006. Epub 2008 Jul 3. Fungal Genet Biol. 2008. PMID: 18647655

Sequence and secondary structure of the mitochondrial small-subunit rRNA V4, V6, and V9 domains reveal highly species-specific variations within the genus Agrocybe.

Gonzalez P, Labarère J. Gonzalez P, et al. Appl Environ Microbiol. 1998 Nov;64(11):4149-60. doi: 10.1128/AEM.64.11.4149-4160.1998. Appl Environ Microbiol. 1998. PMID: 9797259 Free PMC article.

Variation in modes and rates of evolution in nuclear and mitochondrial ribosomal DNA in the mushroom genus Amanita (Agaricales, Basidiomycota): phylogenetic implications.

Moncalvo JM, Drehmel D, Vilgalys R. Moncalvo JM, et al. Mol Phylogenet Evol. 2000 Jul;16(1):48-63. doi: 10.1006/mpev.2000.0782. Mol Phylogenet Evol. 2000. PMID: 10877939

The mitochondrial apocytochrome b genes of two Agrocybe species suggest lateral transfers of group I homing introns among phylogenetically distant fungi.

Mouhamadou B, Férandon C, Barroso G, Labarère J. Mouhamadou B, et al. Fungal Genet Biol. 2006 Mar;43(3):135-45. doi: 10.1016/j.fgb.2005.07.001. Epub 2006 Feb 28. Fungal Genet Biol. 2006. PMID: 16504553

A CAPS test allowing a rapid distinction of Penicillium expansum among fungal species collected on grape berries, inferred from the sequence and secondary structure of the mitochondrial SSU-rRNA.

Garcia C, La Guerche S, Mouhamadou B, Férandon C, Labarère J, Blancard D, Darriet P, Barroso G. Garcia C, et al. Int J Food Microbiol. 2006 Oct 1;111(3):183-90. doi: 10.1016/j.ijfoodmicro.2005.10.004. Epub 2006 Aug 28. Int J Food Microbiol. 2006. PMID: 16935376

Putative secondary structures of unusually long strepsipteran SSU rRNAs and its phylogenetic implications.

Choe CP, Hwang UW, Kim W. Choe CP, et al. Mol Cells. 1999 Apr 30;9(2):191-9. Mol Cells. 1999. PMID: 10340475 Free article.

Phylogenetic relationships of Pleurotus species according to the sequence and secondary structure of the mitochondrial small-subunit rRNA V4, V6 and V9 domains.

Gonzalez P, Labarère J. Gonzalez P, et al. Microbiology (Reading). 2000 Jan;146 ( Pt 1):209-221. doi: 10.1099/00221287-146-1-209. Microbiology (Reading). 2000. PMID: 10658667 Free article.

Unusual accumulation of polymorphic microsatellite loci in a specific region of the mitochondrial genome of two mushroom-forming Agrocybe species.

Mouhamadou B, Férandon C, Chazoule S, Barroso G. Mouhamadou B, et al. FEMS Microbiol Lett. 2007 Jul;272(2):276-81. doi: 10.1111/j.1574-6968.2007.00771.x. Epub 2007 Jun 7. FEMS Microbiol Lett. 2007. PMID: 17559401

Phylogenetic relationships of major clades of Catostomidae (Teleostei: Cypriniformes) as inferred from mitochondrial SSU and LSU rDNA sequences.

Harris PM, Mayden RL. Harris PM, et al. Mol Phylogenet Evol. 2001 Aug;20(2):225-37. doi: 10.1006/mpev.2001.0980. Mol Phylogenet Evol. 2001. PMID: 11476631

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