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Items: 1 to 20 of 111

1.

A high-resolution map of synteny disruptions in gibbon and human genomes.

Carbone L, Vessere GM, ten Hallers BF, Zhu B, Osoegawa K, Mootnick A, Kofler A, Wienberg J, Rogers J, Humphray S, Scott C, Harris RA, Milosavljevic A, de Jong PJ.

PLoS Genet. 2006 Dec 29;2(12):e223. Epub 2006 Nov 13.

2.

Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping.

Misceo D, Capozzi O, Roberto R, Dell'oglio MP, Rocchi M, Stanyon R, Archidiacono N.

Genome Res. 2008 Sep;18(9):1530-7. doi: 10.1101/gr.078295.108. Epub 2008 Jun 13.

3.

Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution.

Carbone L, Harris RA, Vessere GM, Mootnick AR, Humphray S, Rogers J, Kim SK, Wall JD, Martin D, Jurka J, Milosavljevic A, de Jong PJ.

PLoS Genet. 2009 Jun;5(6):e1000538. doi: 10.1371/journal.pgen.1000538. Epub 2009 Jun 26.

4.

Molecular refinement of gibbon genome rearrangements.

Roberto R, Capozzi O, Wilson RK, Mardis ER, Lomiento M, Tuzun E, Cheng Z, Mootnick AR, Archidiacono N, Rocchi M, Eichler EE.

Genome Res. 2007 Feb;17(2):249-57. Epub 2006 Dec 21.

5.

Construction, characterization, and chromosomal mapping of a fosmid library of the white-cheeked gibbon (Nomascus leucogenys).

Chen L, Ye J, Liu Y, Wang J, Su W, Yang F, Nie W.

Genomics Proteomics Bioinformatics. 2007 Dec;5(3-4):207-15. doi: 10.1016/S1672-0229(08)60008-X.

6.

Sequencing human-gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites.

Girirajan S, Chen L, Graves T, Marques-Bonet T, Ventura M, Fronick C, Fulton L, Rocchi M, Fulton RS, Wilson RK, Mardis ER, Eichler EE.

Genome Res. 2009 Feb;19(2):178-90. doi: 10.1101/gr.086041.108. Epub 2008 Nov 24.

7.

A chromosomal inversion unique to the northern white-cheeked gibbon.

Carbone L, Mootnick AR, Nadler T, Moisson P, Ryder O, Roos C, de Jong PJ.

PLoS One. 2009;4(3):e4999. doi: 10.1371/journal.pone.0004999. Epub 2009 Mar 25.

8.

A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons.

Capozzi O, Carbone L, Stanyon RR, Marra A, Yang F, Whelan CW, de Jong PJ, Rocchi M, Archidiacono N.

Genome Res. 2012 Dec;22(12):2520-8. doi: 10.1101/gr.138651.112. Epub 2012 Aug 14.

10.

Reconstruction of genomic rearrangements in great apes and gibbons by chromosome painting.

Jauch A, Wienberg J, Stanyon R, Arnold N, Tofanelli S, Ishida T, Cremer T.

Proc Natl Acad Sci U S A. 1992 Sep 15;89(18):8611-5.

11.

An Alu-based phylogeny of gibbons (hylobatidae).

Meyer TJ, McLain AT, Oldenburg JM, Faulk C, Bourgeois MG, Conlin EM, Mootnick AR, de Jong PJ, Roos C, Carbone L, Batzer MA.

Mol Biol Evol. 2012 Nov;29(11):3441-50. doi: 10.1093/molbev/mss149. Epub 2012 Jun 7.

12.

Chromosomal phylogeny and evolution of gibbons (Hylobatidae).

Müller S, Hollatz M, Wienberg J.

Hum Genet. 2003 Nov;113(6):493-501. Epub 2003 Sep 3.

PMID:
14569461
13.

Gibbon genome and the fast karyotype evolution of small apes.

Carbone L, Harris RA, Gnerre S, Veeramah KR, Lorente-Galdos B, Huddleston J, Meyer TJ, Herrero J, Roos C, Aken B, Anaclerio F, Archidiacono N, Baker C, Barrell D, Batzer MA, Beal K, Blancher A, Bohrson CL, Brameier M, Campbell MS, Capozzi O, Casola C, Chiatante G, Cree A, Damert A, de Jong PJ, Dumas L, Fernandez-Callejo M, Flicek P, Fuchs NV, Gut I, Gut M, Hahn MW, Hernandez-Rodriguez J, Hillier LW, Hubley R, Ianc B, Izsvák Z, Jablonski NG, Johnstone LM, Karimpour-Fard A, Konkel MK, Kostka D, Lazar NH, Lee SL, Lewis LR, Liu Y, Locke DP, Mallick S, Mendez FL, Muffato M, Nazareth LV, Nevonen KA, O'Bleness M, Ochis C, Odom DT, Pollard KS, Quilez J, Reich D, Rocchi M, Schumann GG, Searle S, Sikela JM, Skollar G, Smit A, Sonmez K, ten Hallers B, Terhune E, Thomas GW, Ullmer B, Ventura M, Walker JA, Wall JD, Walter L, Ward MC, Wheelan SJ, Whelan CW, White S, Wilhelm LJ, Woerner AE, Yandell M, Zhu B, Hammer MF, Marques-Bonet T, Eichler EE, Fulton L, Fronick C, Muzny DM, Warren WC, Worley KC, Rogers J, Wilson RK, Gibbs RA.

Nature. 2014 Sep 11;513(7517):195-201. doi: 10.1038/nature13679.

14.

Conserved chromosome segments in Hylobates hoolock revealed by human and H. leucogenys paint probes.

Nie W, Rens W, Wang J, Yang F.

Cytogenet Cell Genet. 2001;92(3-4):248-53.

PMID:
11435697
15.

Comparative cytogenetics of human chromosome 3q21.3 reveals a hot spot for ectopic recombination in hominoid evolution.

Yue Y, Grossmann B, Ferguson-Smith M, Yang F, Haaf T.

Genomics. 2005 Jan;85(1):36-47.

PMID:
15607420
16.

Comprehensive Analyses of White-Handed Gibbon Chromosomes Enables Access to 92 Evolutionary Conserved Breakpoints Compared to the Human Genome.

Weise A, Kosyakova N, Voigt M, Aust N, Mrasek K, Löhmer S, Rubtsov N, Karamysheva TV, Trifonov VA, Hardekopf D, Jančušková T, Pekova S, Wilhelm K, Liehr T, Fan X.

Cytogenet Genome Res. 2015;145(1):42-9. doi: 10.1159/000381764. Epub 2015 Apr 24.

17.

Locational diversity of alpha satellite DNA and intergeneric hybridization aspects in the Nomascus and Hylobates genera of small apes.

Baicharoen S, Miyabe-Nishiwaki T, Arsaithamkul V, Hirai Y, Duangsa-ard K, Siriaroonrat B, Domae H, Srikulnath K, Koga A, Hirai H.

PLoS One. 2014 Oct 7;9(10):e109151. doi: 10.1371/journal.pone.0109151. eCollection 2014.

18.

A most distant intergeneric hybrid offspring (Larcon) of lesser apes, Nomascus leucogenys and Hylobates lar.

Hirai H, Hirai Y, Domae H, Kirihara Y.

Hum Genet. 2007 Dec;122(5):477-83. Epub 2007 Aug 24.

PMID:
17717705
19.

Centromere remodeling in Hoolock leuconedys (Hylobatidae) by a new transposable element unique to the gibbons.

Carbone L, Harris RA, Mootnick AR, Milosavljevic A, Martin DI, Rocchi M, Capozzi O, Archidiacono N, Konkel MK, Walker JA, Batzer MA, de Jong PJ.

Genome Biol Evol. 2012;4(7):648-58. doi: 10.1093/gbe/evs048. Epub 2012 May 16.

20.

In situ hybridization analysis of gibbon chromosomes suggests that amplification of alpha satellite DNA in the telomere region is confined to two of the four genera.

Baicharoen S, Arsaithamkul V, Hirai Y, Hara T, Koga A, Hirai H.

Genome. 2012 Nov;55(11):809-12. doi: 10.1139/gen-2012-0123. Epub 2012 Nov 9.

PMID:
23199575

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