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Items: 1 to 20 of 142

1.

The crystal structure of Arabidopsis thaliana allene oxide cyclase: insights into the oxylipin cyclization reaction.

Hofmann E, Zerbe P, Schaller F.

Plant Cell. 2006 Nov;18(11):3201-17. Epub 2006 Nov 3.

2.

The allene oxide cyclase family of Arabidopsis thaliana: localization and cyclization.

Schaller F, Zerbe P, Reinbothe S, Reinbothe C, Hofmann E, Pollmann S.

FEBS J. 2008 May;275(10):2428-41. doi: 10.1111/j.1742-4658.2008.06388.x. Epub 2008 Apr 3.

3.

Molecular mechanism of enzymatic allene oxide cyclization in plants.

Hofmann E, Pollmann S.

Plant Physiol Biochem. 2008 Mar;46(3):302-8. doi: 10.1016/j.plaphy.2007.12.007. Epub 2007 Dec 31. Review.

PMID:
18272375
4.

A model of dirigent proteins derived from structural and functional similarities with allene oxide cyclase and lipocalins.

Pickel B, Pfannstiel J, Steudle A, Lehmann A, Gerken U, Pleiss J, Schaller A.

FEBS J. 2012 Jun;279(11):1980-93. doi: 10.1111/j.1742-4658.2012.08580.x. Epub 2012 Apr 25.

5.

Crystal structures of Physcomitrella patens AOC1 and AOC2: insights into the enzyme mechanism and differences in substrate specificity.

Neumann P, Brodhun F, Sauer K, Herrfurth C, Hamberg M, Brinkmann J, Scholz J, Dickmanns A, Feussner I, Ficner R.

Plant Physiol. 2012 Nov;160(3):1251-66. doi: 10.1104/pp.112.205138. Epub 2012 Sep 17.

6.

Biosynthesis and in vitro enzymatic synthesis of the isoleucine conjugate of 12-oxo-phytodienoic acid from the isoleucine conjugate of α-linolenic acid.

Uchiyama A, Yaguchi T, Nakagawa H, Sasaki K, Kuwata N, Matsuura H, Takahashi K.

Bioorg Med Chem Lett. 2018 Apr 1;28(6):1020-1023. doi: 10.1016/j.bmcl.2018.02.030. Epub 2018 Feb 15.

PMID:
29486965
7.

On the specificity of allene oxide cyclase.

Ziegler J, Wasternack C, Hamberg M.

Lipids. 1999 Oct;34(10):1005-15.

PMID:
10580327
8.

Crystal structures of the substrate-bound forms of red chlorophyll catabolite reductase: implications for site-specific and stereospecific reaction.

Sugishima M, Okamoto Y, Noguchi M, Kohchi T, Tamiaki H, Fukuyama K.

J Mol Biol. 2010 Oct 8;402(5):879-91. doi: 10.1016/j.jmb.2010.08.021. Epub 2010 Aug 19.

PMID:
20727901
9.

Cloning, molecular and functional characterization of Arabidopsis thaliana allene oxide synthase (CYP 74), the first enzyme of the octadecanoid pathway to jasmonates.

Laudert D, Pfannschmidt U, Lottspeich F, Holländer-Czytko H, Weiler EW.

Plant Mol Biol. 1996 May;31(2):323-35.

PMID:
8756596
10.

Structural insights into the mechanism defining substrate affinity in Arabidopsis thaliana dUTPase: the role of tryptophan 93 in ligand orientation.

Inoguchi N, Chaiseeda K, Yamanishi M, Kim MK, Jang Y, Bajaj M, Chia CP, Becker DF, Moriyama H.

BMC Res Notes. 2015 Dec 15;8:784. doi: 10.1186/s13104-015-1760-1.

11.

Structural insights into the evolutionary paths of oxylipin biosynthetic enzymes.

Lee DS, Nioche P, Hamberg M, Raman CS.

Nature. 2008 Sep 18;455(7211):363-8. doi: 10.1038/nature07307. Epub 2008 Aug 20.

PMID:
18716621
12.

Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana: a recently discovered enzyme in the biosynthesis of L-lysine by plants and Chlamydia.

Watanabe N, Cherney MM, van Belkum MJ, Marcus SL, Flegel MD, Clay MD, Deyholos MK, Vederas JC, James MN.

J Mol Biol. 2007 Aug 17;371(3):685-702. Epub 2007 May 26.

PMID:
17583737
13.

Biosynthesis of 12-oxo-10,15(Z)-phytodienoic acid: identification of an allene oxide cyclase.

Hamberg M.

Biochem Biophys Res Commun. 1988 Oct 14;156(1):543-50.

PMID:
3178850
14.

NMR solution structure of lipocalin-type prostaglandin D synthase: evidence for partial overlapping of catalytic pocket and retinoic acid-binding pocket within the central cavity.

Shimamoto S, Yoshida T, Inui T, Gohda K, Kobayashi Y, Fujimori K, Tsurumura T, Aritake K, Urade Y, Ohkubo T.

J Biol Chem. 2007 Oct 26;282(43):31373-9. Epub 2007 Aug 22. Erratum in: J Biol Chem. 2008 Mar 28;283(13):8772.

15.

Modes of heme binding and substrate access for cytochrome P450 CYP74A revealed by crystal structures of allene oxide synthase.

Li L, Chang Z, Pan Z, Fu ZQ, Wang X.

Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):13883-8. doi: 10.1073/pnas.0804099105. Epub 2008 Sep 11.

16.

Structure and mechanism of an Arabidopsis medium/long-chain-length prenyl pyrophosphate synthase.

Hsieh FL, Chang TH, Ko TP, Wang AH.

Plant Physiol. 2011 Mar;155(3):1079-90. doi: 10.1104/pp.110.168799. Epub 2011 Jan 10.

17.

Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.

Watanabe N, Clay MD, van Belkum MJ, Cherney MM, Vederas JC, James MN.

J Mol Biol. 2008 Dec 31;384(5):1314-29. doi: 10.1016/j.jmb.2008.10.022. Epub 2008 Oct 15.

PMID:
18952095
18.

Homology modeling and site-directed mutagenesis reveal catalytic key amino acids of 3beta-hydroxysteroid-dehydrogenase/C4-decarboxylase from Arabidopsis.

Rahier A, Bergdoll M, Génot G, Bouvier F, Camara B.

Plant Physiol. 2009 Apr;149(4):1872-86. doi: 10.1104/pp.108.132282. Epub 2009 Feb 13.

19.

Crystal structure of the plant PPC decarboxylase AtHAL3a complexed with an ene-thiol reaction intermediate.

Steinbacher S, Hernández-Acosta P, Bieseler B, Blaesse M, Huber R, Culiáñez-Macià FA, Kupke T.

J Mol Biol. 2003 Mar 14;327(1):193-202.

PMID:
12614618
20.

Allene oxide cyclase: a new enzyme in plant lipid metabolism.

Hamberg M, Fahlstadius P.

Arch Biochem Biophys. 1990 Feb 1;276(2):518-26.

PMID:
2306110

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