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Items: 1 to 20 of 228

1.

On the origins of the extracellular matrix in vertebrates.

Huxley-Jones J, Robertson DL, Boot-Handford RP.

Matrix Biol. 2007 Jan;26(1):2-11. Epub 2006 Sep 19.

PMID:
17055232
2.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. X. Genes for cell junctions and extracellular matrix.

Sasakura Y, Shoguchi E, Takatori N, Wada S, Meinertzhagen IA, Satou Y, Satoh N.

Dev Genes Evol. 2003 Jun;213(5-6):303-13. Epub 2003 May 10.

PMID:
12740697
3.

Loss of ancestral genes in the genomic evolution of Ciona intestinalis.

Hughes AL, Friedman R.

Evol Dev. 2005 May-Jun;7(3):196-200.

PMID:
15876192
4.

The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.

Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS.

Science. 2002 Dec 13;298(5601):2157-67.

5.

Structure and the evolutionary implication of the triplicated complement factor B genes of a urochordate ascidian, Ciona intestinalis.

Yoshizaki FY, Ikawa S, Satake M, Satoh N, Nonaka M.

Immunogenetics. 2005 Mar;56(12):930-42. Epub 2005 Jan 27.

PMID:
15778902
6.

Fibrillar collagen: the key to vertebrate evolution? A tale of molecular incest.

Boot-Handford RP, Tuckwell DS.

Bioessays. 2003 Feb;25(2):142-51. Review.

PMID:
12539240
7.

Back to basics--how the evolution of the extracellular matrix underpinned vertebrate evolution.

Huxley-Jones J, Pinney JW, Archer J, Robertson DL, Boot-Handford RP.

Int J Exp Pathol. 2009 Apr;90(2):95-100. doi: 10.1111/j.1365-2613.2008.00637.x. Review.

8.

The evolution of the vertebrate metzincins; insights from Ciona intestinalis and Danio rerio.

Huxley-Jones J, Clarke TK, Beck C, Toubaris G, Robertson DL, Boot-Handford RP.

BMC Evol Biol. 2007 Apr 17;7:63.

9.
10.

The characterisation of six ADAMTS proteases in the basal chordate Ciona intestinalis provides new insights into the vertebrate ADAMTS family.

Huxley-Jones J, Apte SS, Robertson DL, Boot-Handford RP.

Int J Biochem Cell Biol. 2005 Sep;37(9):1838-45.

PMID:
15899586
11.

Phylogenetic analysis of Ciona intestinalis gene superfamilies supports the hypothesis of successive gene expansions.

Leveugle M, Prat K, Popovici C, Birnbaum D, Coulier F.

J Mol Evol. 2004 Feb;58(2):168-81.

PMID:
15042337
12.

The metazoan history of the COE transcription factors. Selection of a variant HLH motif by mandatory inclusion of a duplicated exon in vertebrates.

Daburon V, Mella S, Plouhinec JL, Mazan S, Crozatier M, Vincent A.

BMC Evol Biol. 2008 May 2;8:131. doi: 10.1186/1471-2148-8-131.

13.

Regulatory genes in the ancestral chordate genomes.

Satou Y, Wada S, Sasakura Y, Satoh N.

Dev Genes Evol. 2008 Dec;218(11-12):715-21. doi: 10.1007/s00427-008-0219-y. Epub 2008 Sep 5.

PMID:
18773221
14.

The integrins of the urochordate Ciona intestinalis provide novel insights into the molecular evolution of the vertebrate integrin family.

Ewan R, Huxley-Jones J, Mould AP, Humphries MJ, Robertson DL, Boot-Handford RP.

BMC Evol Biol. 2005 May 13;5:31.

15.

The endothelin system: evolution of vertebrate-specific ligand-receptor interactions by three rounds of genome duplication.

Braasch I, Volff JN, Schartl M.

Mol Biol Evol. 2009 Apr;26(4):783-99. doi: 10.1093/molbev/msp015. Epub 2009 Jan 27.

PMID:
19174480
16.

Two rounds of whole genome duplication in the ancestral vertebrate.

Dehal P, Boore JL.

PLoS Biol. 2005 Oct;3(10):e314. Epub 2005 Sep 6.

17.

Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model.

Aouacheria A, Cluzel C, Lethias C, Gouy M, Garrone R, Exposito JY.

J Biol Chem. 2004 Nov 12;279(46):47711-9. Epub 2004 Sep 8.

18.

Gene duplication and functional divergence during evolution of the cytoskeletal linker protein talin.

Senetar MA, McCann RO.

Gene. 2005 Dec 5;362:141-52. Epub 2005 Oct 10.

PMID:
16216449
19.
20.

A genomewide survey of developmentally relevant genes in Ciona intestinalis. IX. Genes for muscle structural proteins.

Chiba S, Awazu S, Itoh M, Chin-Bow ST, Satoh N, Satou Y, Hastings KE.

Dev Genes Evol. 2003 Jun;213(5-6):291-302. Epub 2003 May 10.

PMID:
12740698

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