Format
Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 546

1.

ProtBuD: a database of biological unit structures of protein families and superfamilies.

Xu Q, Canutescu A, Obradovic Z, Dunbrack RL Jr.

Bioinformatics. 2006 Dec 1;22(23):2876-82. Epub 2006 Oct 2. Erratum in: Bioinformatics. 2007 Aug;23(15):2028.

2.

Biological units and their effect upon the properties and prediction of protein-protein interactions.

Jefferson ER, Walsh TP, Barton GJ.

J Mol Biol. 2006 Dec 15;364(5):1118-29. Epub 2006 Sep 22.

PMID:
17049359
3.

PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics.

von Grotthuss M, Plewczynski D, Ginalski K, Rychlewski L, Shakhnovich EI.

BMC Bioinformatics. 2006 Feb 6;7:53.

4.

PISCES: a protein sequence culling server.

Wang G, Dunbrack RL Jr.

Bioinformatics. 2003 Aug 12;19(12):1589-91.

5.

The InterPro database and tools for protein domain analysis.

Mulder NJ, Apweiler R.

Curr Protoc Bioinformatics. 2008 Mar;Chapter 2:Unit 2.7. doi: 10.1002/0471250953.bi0207s21.

PMID:
18428686
6.

SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.

Teyra J, Doms A, Schroeder M, Pisabarro MT.

BMC Bioinformatics. 2006 Mar 2;7:104.

7.

Using Dali for structural comparison of proteins.

Holm L, Kääriäinen S, Wilton C, Plewczynski D.

Curr Protoc Bioinformatics. 2006 Jul;Chapter 5:Unit 5.5. doi: 10.1002/0471250953.bi0505s14.

PMID:
18428766
8.

SCOPEC: a database of protein catalytic domains.

George RA, Spriggs RV, Thornton JM, Al-Lazikani B, Swindells MB.

Bioinformatics. 2004 Aug 4;20 Suppl 1:i130-6.

9.

PIBASE: a comprehensive database of structurally defined protein interfaces.

Davis FP, Sali A.

Bioinformatics. 2005 May 1;21(9):1901-7. Epub 2005 Jan 18.

10.

Data mining of sequences and 3D structures of allergenic proteins.

Ivanciuc O, Schein CH, Braun W.

Bioinformatics. 2002 Oct;18(10):1358-64.

11.

Domain-based small molecule binding site annotation.

Snyder KA, Feldman HJ, Dumontier M, Salama JJ, Hogue CW.

BMC Bioinformatics. 2006 Mar 17;7:152.

12.

DOCKGROUND resource for studying protein-protein interfaces.

Douguet D, Chen HC, Tovchigrechko A, Vakser IA.

Bioinformatics. 2006 Nov 1;22(21):2612-8. Epub 2006 Aug 23.

13.

The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.

Fischer D, Paś J, Rychlewski L.

Bioinformatics. 2004 Oct 12;20(15):2482-4. Epub 2004 Apr 8.

14.

Seq2Struct: a resource for establishing sequence-structure links.

Via A, Zanzoni A, Helmer-Citterich M.

Bioinformatics. 2005 Feb 15;21(4):551-3. Epub 2004 Sep 28.

15.

Using the tools and resources of the RCSB protein data bank.

Dutta S, M Berman H, F Bluhm W.

Curr Protoc Bioinformatics. 2007 Dec;Chapter 1:Unit1.9. doi: 10.1002/0471250953.bi0109s20.

PMID:
18428680
16.

PDTD: a web-accessible protein database for drug target identification.

Gao Z, Li H, Zhang H, Liu X, Kang L, Luo X, Zhu W, Chen K, Wang X, Jiang H.

BMC Bioinformatics. 2008 Feb 19;9:104. doi: 10.1186/1471-2105-9-104.

17.

FCP: functional coverage of the proteome by structures.

García-Serna R, Opatowski L, Mestres J.

Bioinformatics. 2006 Jul 15;22(14):1792-3. Epub 2006 May 16.

18.

PISCES: recent improvements to a PDB sequence culling server.

Wang G, Dunbrack RL Jr.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W94-8.

19.

MHCBN: a comprehensive database of MHC binding and non-binding peptides.

Bhasin M, Singh H, Raghava GP.

Bioinformatics. 2003 Mar 22;19(5):665-6.

20.

CoC: a database of universally conserved residues in protein folds.

Donald JE, Hubner IA, Rotemberg VM, Shakhnovich EI, Mirny LA.

Bioinformatics. 2005 May 15;21(10):2539-40. Epub 2005 Mar 3.

Items per page

Supplemental Content

Write to the Help Desk