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Items: 1 to 20 of 93

1.

Design of a seven-genome Escherichia coli microarray for comparative genomic profiling.

Willenbrock H, Petersen A, Sekse C, Kiil K, Wasteson Y, Ussery DW.

J Bacteriol. 2006 Nov;188(22):7713-21. Epub 2006 Sep 8.

3.

Microarray analysis and draft genomes of two Escherichia coli O157:H7 lineage II cattle isolates FRIK966 and FRIK2000 investigating lack of Shiga toxin expression.

Dowd SE, Crippen TL, Sun Y, Gontcharova V, Youn E, Muthaiyan A, Wolcott RD, Callaway TR, Ricke SC.

Foodborne Pathog Dis. 2010 Jul;7(7):763-73. doi: 10.1089/fpd.2009.0482.

PMID:
20156085
4.

Genomic subtraction for the identification of putative new virulence factors of an avian pathogenic Escherichia coli strain of O2 serogroup.

Schouler C, Koffmann F, Amory C, Leroy-S├ętrin S, Moulin-Schouleur M.

Microbiology. 2004 Sep;150(Pt 9):2973-84.

PMID:
15347755
5.

Two distinct groups of porcine enteropathogenic Escherichia coli strains of serogroup O45 are revealed by comparative genomic hybridization and virulence gene microarray.

Bruant G, Zhang Y, Garneau P, Wong J, Laing C, Fairbrother JM, Gannon VP, Harel J.

BMC Genomics. 2009 Aug 26;10:402. doi: 10.1186/1471-2164-10-402.

6.

Dichotomy in the evolution of pathogenicity island and bacteriophage encoded integrases from pathogenic Escherichia coli strains.

Napolitano MG, Almagro-Moreno S, Boyd EF.

Infect Genet Evol. 2011 Mar;11(2):423-36. doi: 10.1016/j.meegid.2010.12.003. Epub 2010 Dec 13.

PMID:
21147268
7.

Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays.

Bekal S, Brousseau R, Masson L, Prefontaine G, Fairbrother J, Harel J.

J Clin Microbiol. 2003 May;41(5):2113-25.

8.

Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays.

Dobrindt U, Agerer F, Michaelis K, Janka A, Buchrieser C, Samuelson M, Svanborg C, Gottschalk G, Karch H, Hacker J.

J Bacteriol. 2003 Mar;185(6):1831-40.

9.

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, Yokoyama K, Han CG, Ohtsubo E, Nakayama K, Murata T, Tanaka M, Tobe T, Iida T, Takami H, Honda T, Sasakawa C, Ogasawara N, Yasunaga T, Kuhara S, Shiba T, Hattori M, Shinagawa H.

DNA Res. 2001 Feb 28;8(1):11-22. Erratum in: DNA Res 2001 Apr 27;8(2):96.

PMID:
11258796
10.
11.

Genome evolution in major Escherichia coli O157:H7 lineages.

Zhang Y, Laing C, Steele M, Ziebell K, Johnson R, Benson AK, Taboada E, Gannon VP.

BMC Genomics. 2007 May 16;8:121.

12.

[Construction and immunization of a enterohemorrhagic Escherichia coli O157 attenuated].

Liu J, Sun Y, Feng SZ.

Sheng Wu Gong Cheng Xue Bao. 2007 Mar;23(2):211-7. Chinese.

PMID:
17460890
13.

Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species.

Schubert S, Darlu P, Clermont O, Wieser A, Magistro G, Hoffmann C, Weinert K, Tenaillon O, Matic I, Denamur E.

PLoS Pathog. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.ppat.1000257. Epub 2009 Jan 9.

14.

Specific regions of genome plasticity and genetic diversity of the commensal Escherichia coli A0 34/86.

Hejnova J, Pages D, Rusniok C, Glaser P, Sebo P, Buchrieser C.

Int J Med Microbiol. 2006 Dec;296(8):541-6. Epub 2006 Oct 16.

PMID:
17049458
15.

DNA microarray for discrimination between pathogenic 0157:H7 EDL933 and non-pathogenic Escherichia coli strains.

Wu CF, Valdes JJ, Bentley WE, Sekowski JW.

Biosens Bioelectron. 2003 Oct 30;19(1):1-8.

PMID:
14558993
16.

Characterization of four novel genomic regions of uropathogenic Escherichia coli highly associated with the extraintestinal virulent phenotype: a jigsaw puzzle of genetic modules.

Sorsa LJ, Feldmann F, Hildinger K, Dufke S, Schubert S.

Int J Med Microbiol. 2007 Apr;297(2):83-95. Epub 2007 Feb 5.

PMID:
17280868
17.

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.

Laing CR, Buchanan C, Taboada EN, Zhang Y, Karmali MA, Thomas JE, Gannon VP.

BMC Genomics. 2009 Jun 29;10:287. doi: 10.1186/1471-2164-10-287.

18.

Genomic analysis of the PAI ICL3 locus in pathogenic LEE-negative Shiga toxin-producing Escherichia coli and Citrobacter rodentium.

Girardeau JP, Bertin Y, Martin C.

Microbiology. 2009 Apr;155(Pt 4):1016-27. doi: 10.1099/mic.0.026807-0.

PMID:
19332804
19.

Global expression of prophage genes in Escherichia coli O157:H7 strain EDL933 in response to norfloxacin.

Herold S, Siebert J, Huber A, Schmidt H.

Antimicrob Agents Chemother. 2005 Mar;49(3):931-44.

20.

Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the Whole Genome PCR scanning.

Ogura Y, Kurokawa K, Ooka T, Tashiro K, Tobe T, Ohnishi M, Nakayama K, Morimoto T, Terajima J, Watanabe H, Kuhara S, Hayashi T.

DNA Res. 2006 Feb 28;13(1):3-14. Epub 2006 Feb 22.

PMID:
16766508

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