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Items: 1 to 20 of 154

1.

An initial map of insertion and deletion (INDEL) variation in the human genome.

Mills RE, Luttig CT, Larkins CE, Beauchamp A, Tsui C, Pittard WS, Devine SE.

Genome Res. 2006 Sep;16(9):1182-90. Epub 2006 Aug 10.

3.

Genome and gene alterations by insertions and deletions in the evolution of human and chimpanzee chromosome 22.

Volfovsky N, Oleksyk TK, Cruz KC, Truelove AL, Stephens RM, Smith MW.

BMC Genomics. 2009 Jan 26;10:51. doi: 10.1186/1471-2164-10-51.

4.

Genome-wide characterization of insertion and deletion variation in chicken using next generation sequencing.

Yan Y, Yi G, Sun C, Qu L, Yang N.

PLoS One. 2014 Aug 18;9(8):e104652. doi: 10.1371/journal.pone.0104652. eCollection 2014.

5.

INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events.

Chen FC, Chen CJ, Chuang TJ.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W633-8. Epub 2007 May 21.

6.

Small insertions and deletions (INDELs) in human genomes.

Mullaney JM, Mills RE, Pittard WS, Devine SE.

Hum Mol Genet. 2010 Oct 15;19(R2):R131-6. doi: 10.1093/hmg/ddq400. Epub 2010 Sep 21. Review.

7.

Functional constraint and small insertions and deletions in the ENCODE regions of the human genome.

Clark TG, Andrew T, Cooper GM, Margulies EH, Mullikin JC, Balding DJ.

Genome Biol. 2007;8(9):R180.

8.

Insertion-deletion polymorphisms in 3' regions of maize genes occur frequently and can be used as highly informative genetic markers.

Bhattramakki D, Dolan M, Hanafey M, Wineland R, Vaske D, Register JC 3rd, Tingey SV, Rafalski A.

Plant Mol Biol. 2002 Mar-Apr;48(5-6):539-47.

PMID:
12004893
9.

Insertion-deletions burden in copy number polymorphisms of the Tibetan population.

Veerappa AM, Vishweswaraiah S, Lingaiah K, Murthy NM, Suresh RV, Belur K, Ramachandra NB, Tejaswini, Patel NB, Gowda PK.

Indian J Hum Genet. 2014 Apr;20(2):166-74. doi: 10.4103/0971-6866.142888.

10.

Development of genome-wide insertion and deletion markers for maize, based on next-generation sequencing data.

Liu J, Qu J, Yang C, Tang D, Li J, Lan H, Rong T.

BMC Genomics. 2015 Aug 13;16:601. doi: 10.1186/s12864-015-1797-5.

11.

Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes.

Tian D, Wang Q, Zhang P, Araki H, Yang S, Kreitman M, Nagylaki T, Hudson R, Bergelson J, Chen JQ.

Nature. 2008 Sep 4;455(7209):105-8. doi: 10.1038/nature07175. Epub 2008 Jul 20.

PMID:
18641631
12.

Small insertions are more deleterious than small deletions in human genomes.

Huang S, Li J, Xu A, Huang G, You L.

Hum Mutat. 2013 Dec;34(12):1642-9. doi: 10.1002/humu.22435. Epub 2013 Sep 18.

PMID:
24000181
13.

Variation in the ratio of nucleotide substitution and indel rates across genomes in mammals and bacteria.

Chen JQ, Wu Y, Yang H, Bergelson J, Kreitman M, Tian D.

Mol Biol Evol. 2009 Jul;26(7):1523-31. doi: 10.1093/molbev/msp063. Epub 2009 Mar 27.

PMID:
19329651
14.

Scoring insertion-deletion polymorphisms by dynamic allele-specific hybridization.

Sawyer SL, Howell WM, Brookes AJ.

Biotechniques. 2003 Aug;35(2):292-6, 298.

PMID:
12951770
15.

Human-specific insertions and deletions inferred from mammalian genome sequences.

Chen FC, Chen CJ, Li WH, Chuang TJ.

Genome Res. 2007 Jan;17(1):16-22. Epub 2006 Nov 9.

16.

Strong heterogeneity in mutation rate causes misleading hallmarks of natural selection on indel mutations in the human genome.

Kvikstad EM, Duret L.

Mol Biol Evol. 2014 Jan;31(1):23-36. doi: 10.1093/molbev/mst185. Epub 2013 Oct 9.

17.

A method for discovery of genome-wide SNP between any two genotypes from whole-genome re-sequencing data.

Krishnan SG, Waters DL, Henry RJ.

Methods Mol Biol. 2014;1099:287-94. doi: 10.1007/978-1-62703-715-0_24.

PMID:
24243213
18.

Meta-analysis of indels causing human genetic disease: mechanisms of mutagenesis and the role of local DNA sequence complexity.

Chuzhanova NA, Anassis EJ, Ball EV, Krawczak M, Cooper DN.

Hum Mutat. 2003 Jan;21(1):28-44.

PMID:
12497629
19.

Detection and characterization of small insertion and deletion genetic variants in modern layer chicken genomes.

Boschiero C, Gheyas AA, Ralph HK, Eory L, Paton B, Kuo R, Fulton J, Preisinger R, Kaiser P, Burt DW.

BMC Genomics. 2015 Jul 31;16:562. doi: 10.1186/s12864-015-1711-1.

20.

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