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Items: 1 to 20 of 81

1.

Evidence for intelligent (algorithm) design.

Srinivasan BS, Do CB, Batzoglou S.

Genome Biol. 2006;7(7):322.

2.
3.

Understanding biology through intelligent systems.

Jurisica I, Wigle DA.

Genome Biol. 2002 Oct 24;3(11):reports4036. Epub 2002 Oct 24.

4.

A new seed selection algorithm that maximizes local structural similarity in proteins.

Altun G, Zhong W, Pan Y, Tai PC, Harrison RW.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:5822-5.

PMID:
17946336
5.

Variations on RNA folding and alignment: lessons from Benasque.

Bompfünewerer AF, Backofen R, Bernhart SH, Hertel J, Hofacker IL, Stadler PF, Will S.

J Math Biol. 2008 Jan;56(1-2):129-44. Epub 2007 Jul 5.

PMID:
17611759
6.

Current trends in bioinformatics.

Jain E.

Trends Biotechnol. 2002 Aug;20(8):317-9. No abstract available.

PMID:
12127270
7.

RNA structural alignments, part I: Sankoff-based approaches for structural alignments.

Havgaard JH, Gorodkin J.

Methods Mol Biol. 2014;1097:275-90. doi: 10.1007/978-1-62703-709-9_13.

PMID:
24639164
8.

Routes are trees: the parsing perspective on protein folding.

Hockenmaier J, Joshi AK, Dill KA.

Proteins. 2007 Jan 1;66(1):1-15.

PMID:
17063473
9.
10.

State-of-the-art bioinformatics protein structure prediction tools (Review).

Pavlopoulou A, Michalopoulos I.

Int J Mol Med. 2011 Sep;28(3):295-310. doi: 10.3892/ijmm.2011.705. Epub 2011 May 23. Review.

PMID:
21617841
11.

Energy-based RNA consensus secondary structure prediction in multiple sequence alignments.

Washietl S, Bernhart SH, Kellis M.

Methods Mol Biol. 2014;1097:125-41. doi: 10.1007/978-1-62703-709-9_7. Review.

PMID:
24639158
12.
14.

Multicore and GPU algorithms for Nussinov RNA folding.

Li J, Ranka S, Sahni S.

BMC Bioinformatics. 2014;15 Suppl 8:S1. doi: 10.1186/1471-2105-15-S8-S1. Epub 2014 Jul 14.

16.
17.

MultiSeq: unifying sequence and structure data for evolutionary analysis.

Roberts E, Eargle J, Wright D, Luthey-Schulten Z.

BMC Bioinformatics. 2006 Aug 16;7:382.

18.

Prediction and design of DNA and RNA structures.

Andersen ES.

N Biotechnol. 2010 Jul 31;27(3):184-93. doi: 10.1016/j.nbt.2010.02.012. Epub 2010 Mar 1. Review.

PMID:
20193785
19.
20.

An amino acid substitution matrix for protein conformation identification.

Liu X, Zheng WM.

J Bioinform Comput Biol. 2006 Jun;4(3):769-82.

PMID:
16960974

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