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Items: 1 to 20 of 66

1.

Bacterial genotyping by 16S rRNA mass cataloging.

Jackson GW, McNichols RJ, Fox GE, Willson RC.

BMC Bioinformatics. 2006 Jun 23;7:321.

2.

Microbial identification by mass cataloging.

Zhang Z, Jackson GW, Fox GE, Willson RC.

BMC Bioinformatics. 2006 Mar 8;7:117.

3.
4.

Identification of Yersinia pestis and Escherichia coli strains by whole cell and outer membrane protein extracts with mass spectrometry-based proteomics.

Jabbour RE, Wade MM, Deshpande SV, Stanford MF, Wick CH, Zulich AW, Snyder AP.

J Proteome Res. 2010 Jul 2;9(7):3647-55. doi: 10.1021/pr100402y.

PMID:
20486690
5.
6.

Identification of bacteria using tandem mass spectrometry combined with a proteome database and statistical scoring.

Dworzanski JP, Snyder AP, Chen R, Zhang H, Wishart D, Li L.

Anal Chem. 2004 Apr 15;76(8):2355-66.

PMID:
15080748
8.

[16S rRNA gene sequencing for pathogen identification from clinical specimens].

Lu XX, Wu W, Wang M, Huang YF.

Zhonghua Yi Xue Za Zhi. 2008 Jan 8;88(2):123-6. Chinese.

PMID:
18353221
9.

Identification of characteristic oligonucleotides in the bacterial 16S ribosomal RNA sequence dataset.

Zhang Z, Willson RC, Fox GE.

Bioinformatics. 2002 Feb;18(2):244-50.

PMID:
11847072
10.

Multiple copies of 16s rRNA gene affect the restriction patterns and DGGE profile as revealed by analysis of genome database.

Kang YJ, Cheng J, Mei LJ, Hu J, Piao Z, Yin SX.

Mikrobiologiia. 2010 Sep-Oct;79(5):664-71.

PMID:
21090508
11.

STITCH: algorithm to splice, trim, identify, track, and capture the uniqueness of 16S rRNAs sequence pairs using public or in-house database.

Zhu D, Vaishampayan PA, Venkateswaran K, Fox GE.

Microb Ecol. 2011 Apr;61(3):669-75. doi: 10.1007/s00248-010-9779-2. Epub 2010 Nov 27.

PMID:
21113709
12.
13.

Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.

Mellmann A, Cloud J, Maier T, Keckevoet U, Ramminger I, Iwen P, Dunn J, Hall G, Wilson D, Lasala P, Kostrzewa M, Harmsen D.

J Clin Microbiol. 2008 Jun;46(6):1946-54. doi: 10.1128/JCM.00157-08. Epub 2008 Apr 9.

15.

Suitability of partial 16S ribosomal RNA gene sequence analysis for the identification of dangerous bacterial pathogens.

Ruppitsch W, Stöger A, Indra A, Grif K, Schabereiter-Gurtner C, Hirschl A, Allerberger F.

J Appl Microbiol. 2007 Mar;102(3):852-9.

16.

[Analysis of bacterial diversity of kefir grains by denaturing gradient gel electrophoresis and 16S rDNA sequencing].

Wang YY, Li HR, Jia SF, Wu ZJ, Guo BH.

Wei Sheng Wu Xue Bao. 2006 Apr;46(2):310-3. Chinese.

PMID:
16736598
17.

Establishment and analysis of specific DNA patterns in 16S-23S rRNA gene spacer regions for differentiating different bacteria.

Shang S, Fu J, Dong G, Hong W, Du L, Yu X.

Chin Med J (Engl). 2003 Jan;116(1):129-33.

PMID:
12667405
18.
19.

Identification of bacteria directly from positive blood culture samples by DNA pyrosequencing of the 16S rRNA gene.

Motoshima M, Yanagihara K, Morinaga Y, Matsuda J, Hasegawa H, Kohno S, Kamihira S.

J Med Microbiol. 2012 Nov;61(Pt 11):1556-62. doi: 10.1099/jmm.0.049163-0. Epub 2012 Aug 16.

PMID:
22899780
20.

RIDOM: Ribosomal Differentiation of Medical Micro-organisms Database.

Harmsen D, Rothgänger J, Frosch M, Albert J.

Nucleic Acids Res. 2002 Jan 1;30(1):416-7.

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