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Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.

Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, Choi S, Ohtsubo E, Baba T, Wanner BL, Mori H, Horiuchi T.

Mol Syst Biol. 2006;2:2006.0007. Epub 2006 Feb 21.


XbaI and BlnI genomic cleavage maps of Escherichia coli K-12 strain MG1655 and comparative analysis of other strains.

Perkins JD, Heath JD, Sharma BR, Weinstock GM.

J Mol Biol. 1993 Jul 20;232(2):419-45.


Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes.

Studier FW, Daegelen P, Lenski RE, Maslov S, Kim JF.

J Mol Biol. 2009 Dec 11;394(4):653-80. doi: 10.1016/j.jmb.2009.09.021. Epub 2009 Sep 15.


Genome-Wide Spectra of Transcription Insertions and Deletions Reveal That Slippage Depends on RNA:DNA Hybrid Complementarity.

Traverse CC, Ochman H.

mBio. 2017 Aug 29;8(4). pii: e01230-17. doi: 10.1128/mBio.01230-17.


A low rate of nucleotide changes in Escherichia coli K-12 estimated from a comparison of the genome sequences between two different substrains.

Itoh T, Okayama T, Hashimoto H, Takeda J, Davis RW, Mori H, Gojobori T.

FEBS Lett. 1999 Apr 30;450(1-2):72-6.


Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12.

Ferenci T, Zhou Z, Betteridge T, Ren Y, Liu Y, Feng L, Reeves PR, Wang L.

J Bacteriol. 2009 Jun;191(12):4025-9. doi: 10.1128/JB.00118-09. Epub 2009 Apr 17.


Escherichia coli mutants induced by multi-ion irradiation.

Song Z, Luo L.

J Radiat Res. 2012 Nov 1;53(6):854-9. doi: 10.1093/jrr/rrs061. Epub 2012 Jul 31.


Genomic peculiarity of coding sequences and metabolic potential of probiotic Escherichia coli strain Nissle 1917 inferred from raw genome data.

Sun J, Gunzer F, Westendorf AM, Buer J, Scharfe M, Jarek M, Gössling F, Blöcker H, Zeng AP.

J Biotechnol. 2005 May 4;117(2):147-61.


Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12.

Anton BP, Mongodin EF, Agrawal S, Fomenkov A, Byrd DR, Roberts RJ, Raleigh EA.

PLoS One. 2015 May 26;10(5):e0127446. doi: 10.1371/journal.pone.0127446. eCollection 2015.


NotI genomic cleavage map of Escherichia coli K-12 strain MG1655.

Heath JD, Perkins JD, Sharma B, Weinstock GM.

J Bacteriol. 1992 Jan;174(2):558-67.


The applications of systematic in-frame, single-gene knockout mutant collection of Escherichia coli K-12.

Baba T, Huan HC, Datsenko K, Wanner BL, Mori H.

Methods Mol Biol. 2008;416:183-94. doi: 10.1007/978-1-59745-321-9_12.


Using genomic sequencing for classical genetics in E. coli K12.

Lyons E, Freeling M, Kustu S, Inwood W.

PLoS One. 2011 Feb 25;6(2):e16717. doi: 10.1371/journal.pone.0016717.


Genome sequences of Escherichia coli B strains REL606 and BL21(DE3).

Jeong H, Barbe V, Lee CH, Vallenet D, Yu DS, Choi SH, Couloux A, Lee SW, Yoon SH, Cattolico L, Hur CG, Park HS, Ségurens B, Kim SC, Oh TK, Lenski RE, Studier FW, Daegelen P, Kim JF.

J Mol Biol. 2009 Dec 11;394(4):644-52. doi: 10.1016/j.jmb.2009.09.052. Epub 2009 Sep 26.


The evolution of metabolic networks of E. coli.

Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT.

BMC Syst Biol. 2011 Nov 1;5:182. doi: 10.1186/1752-0509-5-182.


Escherichia coli mutator (Delta)polA is defective in base mismatch correction: the nature of in vivo DNA replication errors.

Tago Y, Imai M, Ihara M, Atofuji H, Nagata Y, Yamamoto K.

J Mol Biol. 2005 Aug 12;351(2):299-308.


Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations.

Conrad TM, Joyce AR, Applebee MK, Barrett CL, Xie B, Gao Y, Palsson BØ.

Genome Biol. 2009;10(10):R118. doi: 10.1186/gb-2009-10-10-r118. Epub 2009 Oct 22.

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