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Construction and characterization of a soybean bacterial artificial chromosome library and use of multiple complementary libraries for genome physical mapping.

Wu CC, Nimmakayala P, Santos FA, Springman R, Scheuring C, Meksem K, Lightfoot DA, Zhang HB.

Theor Appl Genet. 2004 Sep;109(5):1041-50. Epub 2004 May 26.


Development of a pooled probe method for locating small gene families in a physical map of soybean using stress related paralogues and a BAC minimum tile path.

Shopinski KL, Iqbal MJ, Shultz JL, Jayaraman D, Lightfoot DA.

Plant Methods. 2006 Dec 8;2:20. doi: 10.1186/1746-4811-2-20.


The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

Shultz JL, Kurunam D, Shopinski K, Iqbal MJ, Kazi S, Zobrist K, Bashir R, Yaegashi S, Lavu N, Afzal AJ, Yesudas CR, Kassem MA, Wu C, Zhang HB, Town CD, Meksem K, Lightfoot DA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D758-65.


Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.).

Ha J, Abernathy B, Nelson W, Grant D, Wu X, Nguyen HT, Stacey G, Yu Y, Wing RA, Shoemaker RC, Jackson SA.

G3 (Bethesda). 2012 Mar;2(3):321-9. doi: 10.1534/g3.111.001834. Epub 2012 Mar 1.


Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.

Luo MC, Ma Y, You FM, Anderson OD, Kopecký D, Simková H, Safár J, Dolezel J, Gill B, McGuire PE, Dvorak J.

BMC Genomics. 2010 Feb 19;11:122. doi: 10.1186/1471-2164-11-122.


A BAC- and BIBAC-based physical map of the soybean genome.

Wu C, Sun S, Nimmakayala P, Santos FA, Meksem K, Springman R, Ding K, Lightfoot DA, Zhang HB.

Genome Res. 2004 Feb;14(2):319-26. Epub 2004 Jan 12.


A bacterial artificial chromosome based physical map of the Ustilago maydis genome.

Meksem K, Shultz J, Tebbji F, Jamai A, Henrich J, Kranz H, Arenz M, Schlueter T, Ishihara H, Jyothi LN, Zhang HB, Lightfoot DA.

Genome. 2005 Apr;48(2):207-16.


Genetic marker anchoring by six-dimensional pools for development of a soybean physical map.

Wu X, Zhong G, Findley SD, Cregan P, Stacey G, Nguyen HT.

BMC Genomics. 2008 Jan 22;9:28. doi: 10.1186/1471-2164-9-28.


Physical mapping and BAC-end sequence analysis provide initial insights into the flax (Linum usitatissimum L.) genome.

Ragupathy R, Rathinavelu R, Cloutier S.

BMC Genomics. 2011 May 9;12:217. doi: 10.1186/1471-2164-12-217.


Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics.

Huo N, Gu YQ, Lazo GR, Vogel JP, Coleman-Derr D, Luo MC, Thilmony R, Garvin DF, Anderson OD.

Genome. 2006 Sep;49(9):1099-108.


BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.).

Schulte D, Ariyadasa R, Shi B, Fleury D, Saski C, Atkins M, deJong P, Wu CC, Graner A, Langridge P, Stein N.

BMC Genomics. 2011 May 19;12:247. doi: 10.1186/1471-2164-12-247.


Advancing Eucalyptus genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries.

Paiva JA, Prat E, Vautrin S, Santos MD, San-Clemente H, Brommonschenkel S, Fonseca PG, Grattapaglia D, Song X, Ammiraju JS, Kudrna D, Wing RA, Freitas AT, Bergès H, Grima-Pettenati J.

BMC Genomics. 2011 Mar 4;12:137. doi: 10.1186/1471-2164-12-137.


Genomic tools development for Aquilegia: construction of a BAC-based physical map.

Fang GC, Blackmon BP, Henry DC, Staton ME, Saski CA, Hodges SA, Tomkins JP, Luo H.

BMC Genomics. 2010 Nov 8;11:621. doi: 10.1186/1471-2164-11-621.


Generation of a BAC-based physical map of the melon genome.

González VM, Garcia-Mas J, Arús P, Puigdomènech P.

BMC Genomics. 2010 May 28;11:339. doi: 10.1186/1471-2164-11-339.


A BAC-based physical map of the Hessian fly genome anchored to polytene chromosomes.

Aggarwal R, Benatti TR, Gill N, Zhao C, Chen MS, Fellers JP, Schemerhorn BJ, Stuart JJ.

BMC Genomics. 2009 Jul 2;10:293. doi: 10.1186/1471-2164-10-293.


A hybrid BAC physical map of potato: a framework for sequencing a heterozygous genome.

de Boer JM, Borm TJ, Jesse T, Brugmans B, Wiggers-Perebolte L, de Leeuw L, Tang X, Bryan GJ, Bakker J, van Eck HJ, Visser RG.

BMC Genomics. 2011 Dec 5;12:594. doi: 10.1186/1471-2164-12-594. Erratum in: BMC Genomics. 2012;13:423. Wiggers-Perebolte, Lian [added]; de Leeuw, Linda [added].


A BAC-based physical map of the apple genome.

Han Y, Gasic K, Marron B, Beever JE, Korban SS.

Genomics. 2007 May;89(5):630-7. Epub 2007 Jan 31.

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