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Items: 1 to 20 of 191


Identification of small Hfq-binding RNAs in Listeria monocytogenes.

Christiansen JK, Nielsen JS, Ebersbach T, Valentin-Hansen P, Søgaard-Andersen L, Kallipolitis BH.

RNA. 2006 Jul;12(7):1383-96. Epub 2006 May 8.


Defining a role for Hfq in Gram-positive bacteria: evidence for Hfq-dependent antisense regulation in Listeria monocytogenes.

Nielsen JS, Lei LK, Ebersbach T, Olsen AS, Klitgaard JK, Valentin-Hansen P, Kallipolitis BH.

Nucleic Acids Res. 2010 Jan;38(3):907-19. doi: 10.1093/nar/gkp1081. Epub 2009 Nov 26.


The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence.

Christiansen JK, Larsen MH, Ingmer H, Søgaard-Andersen L, Kallipolitis BH.

J Bacteriol. 2004 Jun;186(11):3355-62.


Despite similar binding to the Hfq protein regulatory RNAs widely differ in their competition performance.

Olejniczak M.

Biochemistry. 2011 May 31;50(21):4427-40. doi: 10.1021/bi102043f. Epub 2011 May 3.


PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action.

Otaka H, Ishikawa H, Morita T, Aiba H.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13059-64. doi: 10.1073/pnas.1107050108. Epub 2011 Jul 25.


Hfq binding changes the structure of Escherichia coli small noncoding RNAs OxyS and RprA, which are involved in the riboregulation of rpoS.

Henderson CA, Vincent HA, Casamento A, Stone CM, Phillips JO, Cary PD, Sobott F, Gowers DM, Taylor JE, Callaghan AJ.

RNA. 2013 Aug;19(8):1089-104. doi: 10.1261/rna.034595.112. Epub 2013 Jun 26.


Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5' rpoS mRNA leader region.

Updegrove T, Wilf N, Sun X, Wartell RM.

Biochemistry. 2008 Oct 28;47(43):11184-95. doi: 10.1021/bi800479p. Epub 2008 Oct 1.


Competition among Hfq-binding small RNAs in Escherichia coli.

Moon K, Gottesman S.

Mol Microbiol. 2011 Dec;82(6):1545-62. doi: 10.1111/j.1365-2958.2011.07907.x. Epub 2011 Nov 20.


Structure of bacterial regulatory RNAs determines their performance in competition for the chaperone protein Hfq.

Małecka EM, Stróżecka J, Sobańska D, Olejniczak M.

Biochemistry. 2015 Feb 10;54(5):1157-70. doi: 10.1021/bi500741d. Epub 2015 Jan 26.


Structural basis for RNA 3'-end recognition by Hfq.

Sauer E, Weichenrieder O.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13065-70. doi: 10.1073/pnas.1103420108. Epub 2011 Jul 7.


Disruption of small RNA signaling caused by competition for Hfq.

Hussein R, Lim HN.

Proc Natl Acad Sci U S A. 2011 Jan 18;108(3):1110-5. doi: 10.1073/pnas.1010082108. Epub 2010 Dec 28.


The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages.

Mraheil MA, Billion A, Mohamed W, Mukherjee K, Kuenne C, Pischimarov J, Krawitz C, Retey J, Hartsch T, Chakraborty T, Hain T.

Nucleic Acids Res. 2011 May;39(10):4235-48. doi: 10.1093/nar/gkr033. Epub 2011 Jan 29.


Essential requirements for robust signaling in Hfq dependent small RNA networks.

Adamson DN, Lim HN.

PLoS Comput Biol. 2011 Aug;7(8):e1002138. doi: 10.1371/journal.pcbi.1002138. Epub 2011 Aug 18.


Cycling of RNAs on Hfq.

Wagner EG.

RNA Biol. 2013 Apr;10(4):619-26. doi: 10.4161/rna.24044. Epub 2013 Mar 6. Review.


Cycling of the Sm-like protein Hfq on the DsrA small regulatory RNA.

Lease RA, Woodson SA.

J Mol Biol. 2004 Dec 10;344(5):1211-23.


Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria.

Pandey SP, Winkler JA, Li H, Camacho DM, Collins JJ, Walker GC.

BMC Genomics. 2014 Feb 11;15:121. doi: 10.1186/1471-2164-15-121.


Determination of sRNA expressions by RNA-seq in Yersinia pestis grown in vitro and during infection.

Yan Y, Su S, Meng X, Ji X, Qu Y, Liu Z, Wang X, Cui Y, Deng Z, Zhou D, Jiang W, Yang R, Han Y.

PLoS One. 2013 Sep 11;8(9):e74495. doi: 10.1371/journal.pone.0074495. eCollection 2013.


Identifying Hfq-binding small RNA targets in Escherichia coli.

Zhang Y, Sun S, Wu T, Wang J, Liu C, Chen L, Zhu X, Zhao Y, Zhang Z, Shi B, Lu H, Chen R.

Biochem Biophys Res Commun. 2006 May 12;343(3):950-5. Epub 2006 Mar 20.


How to find small non-coding RNAs in bacteria.

Vogel J, Sharma CM.

Biol Chem. 2005 Dec;386(12):1219-38. Review.


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