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Items: 1 to 20 of 89

1.

Segregating variation in the transcriptome: cis regulation and additivity of effects.

Hughes KA, Ayroles JF, Reedy MM, Drnevich JM, Rowe KC, Ruedi EA, Cáceres CE, Paige KN.

Genetics. 2006 Jul;173(3):1347-55. Epub 2006 Apr 19.

2.

Dominance and the evolutionary accumulation of cis- and trans-effects on gene expression.

Lemos B, Araripe LO, Fontanillas P, Hartl DL.

Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14471-6. doi: 10.1073/pnas.0805160105. Epub 2008 Sep 12.

3.

A transcriptional network associated with natural variation in Drosophila aggressive behavior.

Edwards AC, Ayroles JF, Stone EA, Carbone MA, Lyman RF, Mackay TF.

Genome Biol. 2009;10(7):R76. doi: 10.1186/gb-2009-10-7-r76. Epub 2009 Jul 16.

4.

Cis and trans regulatory effects contribute to natural variation in transcriptome of Drosophila melanogaster.

Genissel A, McIntyre LM, Wayne ML, Nuzhdin SV.

Mol Biol Evol. 2008 Jan;25(1):101-10. Epub 2007 Nov 12.

PMID:
17998255
5.

Systems genetics of complex traits in Drosophila melanogaster.

Ayroles JF, Carbone MA, Stone EA, Jordan KW, Lyman RF, Magwire MM, Rollmann SM, Duncan LH, Lawrence F, Anholt RR, Mackay TF.

Nat Genet. 2009 Mar;41(3):299-307. doi: 10.1038/ng.332. Epub 2009 Feb 22.

6.

Complex genetic interactions underlying expression differences between Drosophila races: analysis of chromosome substitutions.

Wang HY, Fu Y, McPeek MS, Lu X, Nuzhdin S, Xu A, Lu J, Wu ML, Wu CI.

Proc Natl Acad Sci U S A. 2008 Apr 29;105(17):6362-7. doi: 10.1073/pnas.0711774105. Epub 2008 Apr 22.

7.

Natural genetic variation in transcriptome reflects network structure inferred with major effect mutations: insulin/TOR and associated phenotypes in Drosophila melanogaster.

Nuzhdin SV, Brisson JA, Pickering A, Wayne ML, Harshman LG, McIntyre LM.

BMC Genomics. 2009 Mar 24;10:124. doi: 10.1186/1471-2164-10-124.

8.

Independent effects of cis- and trans-regulatory variation on gene expression in Drosophila melanogaster.

Wittkopp PJ, Haerum BK, Clark AG.

Genetics. 2008 Mar;178(3):1831-5. doi: 10.1534/genetics.107.082032. Epub 2008 Feb 3.

9.

Covariation of larval gene expression and adult body size in natural populations of Drosophila melanogaster.

Bochdanovits Z, van der Klis H, de Jong G.

Mol Biol Evol. 2003 Nov;20(11):1760-6. Epub 2003 Jun 27.

PMID:
12832628
10.

Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism.

Liaubet L, Lobjois V, Faraut T, Tircazes A, Benne F, Iannuccelli N, Pires J, Glénisson J, Robic A, Le Roy P, Sancristobal M, Cherel P.

BMC Genomics. 2011 Nov 4;12:548. doi: 10.1186/1471-2164-12-548.

11.

Complex patterns of cis-regulatory polymorphisms in ebony underlie standing pigmentation variation in Drosophila melanogaster.

Miyagi R, Akiyama N, Osada N, Takahashi A.

Mol Ecol. 2015 Dec;24(23):5829-41. doi: 10.1111/mec.13432. Epub 2015 Nov 20.

PMID:
26503353
12.

Evolutionary changes in cis and trans gene regulation.

Wittkopp PJ, Haerum BK, Clark AG.

Nature. 2004 Jul 1;430(6995):85-8.

PMID:
15229602
13.
14.

Additivity and trans-acting effects on gene expression in male Drosophila simulans.

Wayne ML, Pan YJ, Nuzhdin SV, McIntyre LM.

Genetics. 2004 Nov;168(3):1413-20.

15.

Molecular Mechanisms and Evolutionary Processes Contributing to Accelerated Divergence of Gene Expression on the Drosophila X Chromosome.

Coolon JD, Stevenson KR, McManus CJ, Yang B, Graveley BR, Wittkopp PJ.

Mol Biol Evol. 2015 Oct;32(10):2605-15. doi: 10.1093/molbev/msv135. Epub 2015 Jun 2.

16.

Genetic architecture of two fitness-related traits in Drosophila melanogaster: ovariole number and thorax length.

Telonis-Scott M, McIntyre LM, Wayne ML.

Genetica. 2005 Nov;125(2-3):211-22.

PMID:
16247693
17.

The rapid evolution of X-linked male-biased gene expression and the large-X effect in Drosophila yakuba, D. santomea, and their hybrids.

Llopart A.

Mol Biol Evol. 2012 Dec;29(12):3873-86. doi: 10.1093/molbev/mss190. Epub 2012 Jul 26.

PMID:
22844069
18.

Natural variation of gene models in Drosophila melanogaster.

Kurmangaliyev YZ, Favorov AV, Osman NM, Lehmann KV, Campo D, Salomon MP, Tower J, Gelfand MS, Nuzhdin SV.

BMC Genomics. 2015 Mar 17;16:198. doi: 10.1186/s12864-015-1415-6.

19.

Sex-dependent gene expression and evolution of the Drosophila transcriptome.

Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL.

Science. 2003 Jun 13;300(5626):1742-5.

20.

Evolution of gene expression in the Drosophila melanogaster subgroup.

Rifkin SA, Kim J, White KP.

Nat Genet. 2003 Feb;33(2):138-44. Epub 2003 Jan 27.

PMID:
12548287

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