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Items: 1 to 20 of 330

1.
2.

PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.

Fong C, Rohmer L, Radey M, Wasnick M, Brittnacher MJ.

BMC Bioinformatics. 2008 Mar 26;9:170. doi: 10.1186/1471-2105-9-170.

3.

GenColors: annotation and comparative genomics of prokaryotes made easy.

Romualdi A, Felder M, Rose D, Gausmann U, Schilhabel M, Glöckner G, Platzer M, Sühnel J.

Methods Mol Biol. 2007;395:75-96.

PMID:
17993668
4.

Cross platform microarray analysis for robust identification of differentially expressed genes.

Bosotti R, Locatelli G, Healy S, Scacheri E, Sartori L, Mercurio C, Calogero R, Isacchi A.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S5.

5.

Experimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms.

Barnes M, Freudenberg J, Thompson S, Aronow B, Pavlidis P.

Nucleic Acids Res. 2005 Oct 19;33(18):5914-23. Print 2005.

6.
7.

List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists.

Cahan P, Ahmad AM, Burke H, Fu S, Lai Y, Florea L, Dharker N, Kobrinski T, Kale P, McCaffrey TA.

Gene. 2005 Oct 24;360(1):78-82. Epub 2005 Sep 2. Review.

PMID:
16140476
8.

Using ontologies to annotate microarray experiments.

Whetzel PL, Parkinson H, Stoeckert CJ Jr.

Methods Enzymol. 2006;411:325-39. Review.

PMID:
16939798
9.

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.

Pattyn F, Hoebeeck J, Robbrecht P, Michels E, De Paepe A, Bottu G, Coornaert D, Herzog R, Speleman F, Vandesompele J.

BMC Bioinformatics. 2006 Nov 9;7:496.

10.

Dual-genome primer design for construction of DNA microarrays.

Andersson A, Bernander R, Nilsson P.

Bioinformatics. 2005 Feb 1;21(3):325-32. Epub 2004 Aug 27.

PMID:
15333463
11.

The application of microarray technology to the analysis of the cancer genome.

Cowell JK, Hawthorn L.

Curr Mol Med. 2007 Feb;7(1):103-20. Review.

PMID:
17311536
12.

The genopolis microarray database.

Splendiani A, Brandizi M, Even G, Beretta O, Pavelka N, Pelizzola M, Mayhaus M, Foti M, Mauri G, Ricciardi-Castagnoli P.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S21.

13.

The UCSC Archaeal Genome Browser.

Schneider KL, Pollard KS, Baertsch R, Pohl A, Lowe TM.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D407-10.

14.
15.

Microarrays in cancer research.

Grant GM, Fortney A, Gorreta F, Estep M, Del Giacco L, Van Meter A, Christensen A, Appalla L, Naouar C, Jamison C, Al-Timimi A, Donovan J, Cooper J, Garrett C, Chandhoke V.

Anticancer Res. 2004 Mar-Apr;24(2A):441-8.

16.

Visualization and analysis of microarray and gene ontology data with treemaps.

Baehrecke EH, Dang N, Babaria K, Shneiderman B.

BMC Bioinformatics. 2004 Jun 28;5:84.

17.

Microarray methods in Drosophila neurobiology.

Mee CJ.

Invert Neurosci. 2005 Nov;5(3-4):189-95. Epub 2005 Oct 24.

PMID:
16180035
18.

Dynamic integration of gene annotation and its application to microarray analysis.

Dai H, Tian B, Zhao WD, Leung A, Smith SR, Wan JS, Yao X.

J Bioinform Comput Biol. 2004 Jan;1(4):627-45.

PMID:
15290757
19.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

20.

ArrayIDer: automated structural re-annotation pipeline for DNA microarrays.

van den Berg BH, Konieczka JH, McCarthy FM, Burgess SC.

BMC Bioinformatics. 2009 Jan 23;10:30. doi: 10.1186/1471-2105-10-30.

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