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Items: 1 to 20 of 244

1.

Automatic discovery of cross-family sequence features associated with protein function.

Brameier M, Haan J, Krings A, MacCallum RM.

BMC Bioinformatics. 2006 Jan 12;7:16.

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Feature selection and the class imbalance problem in predicting protein function from sequence.

Al-Shahib A, Breitling R, Gilbert D.

Appl Bioinformatics. 2005;4(3):195-203. Erratum in: Appl Bioinformatics. 2006;5(2):124.

PMID:
16231961
6.

Hum-PLoc: a novel ensemble classifier for predicting human protein subcellular localization.

Chou KC, Shen HB.

Biochem Biophys Res Commun. 2006 Aug 18;347(1):150-7. Epub 2006 Jun 21. Erratum in: Biochem Biophys Res Commun. 2006 Oct 6;348(4):1479.

PMID:
16808903
7.

Bio-support vector machines for computational proteomics.

Yang ZR, Chou KC.

Bioinformatics. 2004 Mar 22;20(5):735-41. Epub 2004 Jan 29.

PMID:
14751989
8.

A correlated motif approach for finding short linear motifs from protein interaction networks.

Tan SH, Hugo W, Sung WK, Ng SK.

BMC Bioinformatics. 2006 Nov 16;7:502.

9.

Predicting protein structure classes from function predictions.

Sommer I, Rahnenf├╝hrer J, Domingues FS, de Lichtenberg U, Lengauer T.

Bioinformatics. 2004 Mar 22;20(5):770-6. Epub 2004 Jan 29.

PMID:
14751994
10.

Hierarchical learning architecture with automatic feature selection for multiclass protein fold classification.

Huang CD, Lin CT, Pal NR.

IEEE Trans Nanobioscience. 2003 Dec;2(4):221-32.

PMID:
15376912
11.

Global sequence properties for superfamily prediction: a machine learning approach.

Dobson RJ, Munroe PB, Caulfield MJ, Saqi MA.

J Integr Bioinform. 2009 Aug 23;6(1):109. doi: 10.2390/biecoll-jib-2009-109.

PMID:
20134076
12.
13.

Discovering sequence motifs.

Bailey TL.

Methods Mol Biol. 2008;452:231-51. doi: 10.1007/978-1-60327-159-2_12. Review.

PMID:
18566768
14.

MACSIMS: multiple alignment of complete sequences information management system.

Thompson JD, Muller A, Waterhouse A, Procter J, Barton GJ, Plewniak F, Poch O.

BMC Bioinformatics. 2006 Jun 23;7:318.

16.

Prediction of protein subcellular locations using a new measure of information discrepancy.

Jin L, Tang H, Fang W.

J Bioinform Comput Biol. 2005 Aug;3(4):915-27.

PMID:
16078367
17.

A functional hierarchical organization of the protein sequence space.

Kaplan N, Friedlich M, Fromer M, Linial M.

BMC Bioinformatics. 2004 Dec 14;5:196.

18.

Prediction of protein subcellular localization.

Yu CS, Chen YC, Lu CH, Hwang JK.

Proteins. 2006 Aug 15;64(3):643-51.

PMID:
16752418
19.

Predicting protein disorder by analyzing amino acid sequence.

Yang JY, Yang MQ.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S8. doi: 10.1186/1471-2164-9-S2-S8.

20.

Automated discovery of 3D motifs for protein function annotation.

Polacco BJ, Babbitt PC.

Bioinformatics. 2006 Mar 15;22(6):723-30. Epub 2006 Jan 12.

PMID:
16410325

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