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Items: 1 to 20 of 133

1.

The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

Shultz JL, Kurunam D, Shopinski K, Iqbal MJ, Kazi S, Zobrist K, Bashir R, Yaegashi S, Lavu N, Afzal AJ, Yesudas CR, Kassem MA, Wu C, Zhang HB, Town CD, Meksem K, Lightfoot DA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D758-65.

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Genetic marker anchoring by six-dimensional pools for development of a soybean physical map.

Wu X, Zhong G, Findley SD, Cregan P, Stacey G, Nguyen HT.

BMC Genomics. 2008 Jan 22;9:28. doi: 10.1186/1471-2164-9-28.

4.

The development of BAC-end sequence-based microsatellite markers and placement in the physical and genetic maps of soybean.

Shultz JL, Kazi S, Bashir R, Afzal JA, Lightfoot DA.

Theor Appl Genet. 2007 Apr;114(6):1081-90. Epub 2007 Feb 8.

PMID:
17287974
5.
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Soybean bacterial artificial chromosome contigs anchored with RFLPs: insights into genome duplication and gene clustering.

Mudge J, Huihuang Y, Denny RL, Howe DK, Danesh D, Marek LF, Retzel E, Shoemaker RC, Young ND.

Genome. 2004 Apr;47(2):361-72.

PMID:
15060589
7.

A bacterial artificial chromosome based physical map of the Ustilago maydis genome.

Meksem K, Shultz J, Tebbji F, Jamai A, Henrich J, Kranz H, Arenz M, Schlueter T, Ishihara H, Jyothi LN, Zhang HB, Lightfoot DA.

Genome. 2005 Apr;48(2):207-16.

PMID:
15838542
8.

Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.

Luo MC, Ma Y, You FM, Anderson OD, Kopecký D, Simková H, Safár J, Dolezel J, Gill B, McGuire PE, Dvorak J.

BMC Genomics. 2010 Feb 19;11:122. doi: 10.1186/1471-2164-11-122.

9.

A BAC- and BIBAC-based physical map of the soybean genome.

Wu C, Sun S, Nimmakayala P, Santos FA, Meksem K, Springman R, Ding K, Lightfoot DA, Zhang HB.

Genome Res. 2004 Feb;14(2):319-26. Epub 2004 Jan 12.

10.

The first generation of a BAC-based physical map of Brassica rapa.

Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

BMC Genomics. 2008 Jun 12;9:280. doi: 10.1186/1471-2164-9-280.

11.

Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.).

Ha J, Abernathy B, Nelson W, Grant D, Wu X, Nguyen HT, Stacey G, Yu Y, Wing RA, Shoemaker RC, Jackson SA.

G3 (Bethesda). 2012 Mar;2(3):321-9. doi: 10.1534/g3.111.001834. Epub 2012 Mar 1.

12.

Genomic tools development for Aquilegia: construction of a BAC-based physical map.

Fang GC, Blackmon BP, Henry DC, Staton ME, Saski CA, Hodges SA, Tomkins JP, Luo H.

BMC Genomics. 2010 Nov 8;11:621. doi: 10.1186/1471-2164-11-621.

13.

Comparative genomic analysis of sequences sampled from a small region on soybean (Glycine max) molecular linkage group G.

Foster-Hartnett D, Mudge J, Larsen D, Danesh D, Yan H, Denny R, Peñuela S, Young ND.

Genome. 2002 Aug;45(4):634-45.

PMID:
12175066
14.

Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps.

Shoemaker RC, Grant D, Olson T, Warren WC, Wing R, Yu Y, Kim H, Cregan P, Joseph B, Futrell-Griggs M, Nelson W, Davito J, Walker J, Wallis J, Kremitski C, Scheer D, Clifton SW, Graves T, Nguyen H, Wu X, Luo M, Dvorak J, Nelson R, Cannon S, Tomkins J, Schmutz J, Stacey G, Jackson S.

Genome. 2008 Apr;51(4):294-302. doi: 10.1139/G08-010.

PMID:
18356965
15.

A BAC-based physical map of the Hessian fly genome anchored to polytene chromosomes.

Aggarwal R, Benatti TR, Gill N, Zhao C, Chen MS, Fellers JP, Schemerhorn BJ, Stuart JJ.

BMC Genomics. 2009 Jul 2;10:293. doi: 10.1186/1471-2164-10-293.

16.

Chromosome-level homeology in paleopolyploid soybean (Glycine max) revealed through integration of genetic and chromosome maps.

Walling JG, Shoemaker R, Young N, Mudge J, Jackson S.

Genetics. 2006 Mar;172(3):1893-900. Epub 2005 Dec 15.

17.

Estimates of conserved microsynteny among the genomes of Glycine max, Medicago truncatula and Arabidopsis thaliana.

Yan HH, Mudge J, Kim DJ, Larsen D, Shoemaker RC, Cook DR, Young ND.

Theor Appl Genet. 2003 May;106(7):1256-65. Epub 2003 Jan 25.

PMID:
12748777
18.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

19.

Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing.

Schlueter JA, Lin JY, Schlueter SD, Vasylenko-Sanders IF, Deshpande S, Yi J, O'Bleness M, Roe BA, Nelson RT, Scheffler BE, Jackson SA, Shoemaker RC.

BMC Genomics. 2007 Sep 19;8:330.

20.

Comparative physical mapping reveals features of microsynteny between Glycine max, Medicago truncatula, and Arabidopsis thaliana.

Yan HH, Mudge J, Kim DJ, Shoemaker RC, Cook DR, Young ND.

Genome. 2004 Feb;47(1):141-55.

PMID:
15060611

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