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Items: 1 to 20 of 200

1.

Evolution of non-LTR retrotransposons in the trypanosomatid genomes: Leishmania major has lost the active elements.

Bringaud F, Ghedin E, Blandin G, Bartholomeu DC, Caler E, Levin MJ, Baltz T, El-Sayed NM.

Mol Biochem Parasitol. 2006 Feb;145(2):158-70. Epub 2005 Oct 10.

PMID:
16257065
2.

Trypanosomatid genomes contain several subfamilies of ingi-related retroposons.

Bringaud F, Berriman M, Hertz-Fowler C.

Eukaryot Cell. 2009 Oct;8(10):1532-42. doi: 10.1128/EC.00183-09. Epub 2009 Aug 7.

3.

Identification of non-autonomous non-LTR retrotransposons in the genome of Trypanosoma cruzi.

Bringaud F, García-Pérez JL, Heras SR, Ghedin E, El-Sayed NM, Andersson B, Baltz T, Lopez MC.

Mol Biochem Parasitol. 2002 Sep-Oct;124(1-2):73-8.

PMID:
12387852
4.

The wide expansion of hepatitis delta virus-like ribozymes throughout trypanosomatid genomes is linked to the spreading of L1Tc/ingi clade mobile elements.

Sánchez-Luque FJ, López MC, Carreira PE, Alonso C, Thomas MC.

BMC Genomics. 2014 May 6;15:340. doi: 10.1186/1471-2164-15-340.

5.

The ingi and RIME non-LTR retrotransposons are not randomly distributed in the genome of Trypanosoma brucei.

Bringaud F, Biteau N, Zuiderwijk E, Berriman M, El-Sayed NM, Ghedin E, Melville SE, Hall N, Baltz T.

Mol Biol Evol. 2004 Mar;21(3):520-8. Epub 2003 Dec 23.

PMID:
14694076
6.

Organization and evolution of two SIDER retroposon subfamilies and their impact on the Leishmania genome.

Smith M, Bringaud F, Papadopoulou B.

BMC Genomics. 2009 May 22;10:240. doi: 10.1186/1471-2164-10-240.

7.

A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei.

Bringaud F, Biteau N, Melville SE, Hez S, El-Sayed NM, Leech V, Berriman M, Hall N, Donelson JE, Baltz T.

Eukaryot Cell. 2002 Feb;1(1):137-51. Erratum in: Eukaryot Cell 2002 Apr;1(2):305.

8.

The VIPER elements of trypanosomes constitute a novel group of tyrosine recombinase-enconding retrotransposons.

Lorenzi HA, Robledo G, Levin MJ.

Mol Biochem Parasitol. 2006 Feb;145(2):184-94. Epub 2005 Oct 24.

PMID:
16297462
9.

TSIDER1, a short and non-autonomous Salivarian trypanosome-specific retroposon related to the ingi6 subclade.

Bringaud F, Berriman M, Hertz-Fowler C.

Mol Biochem Parasitol. 2011 Sep;179(1):30-6. doi: 10.1016/j.molbiopara.2011.05.007. Epub 2011 Jun 1.

10.
11.

Gene synteny and evolution of genome architecture in trypanosomatids.

Ghedin E, Bringaud F, Peterson J, Myler P, Berriman M, Ivens A, Andersson B, Bontempi E, Eisen J, Angiuoli S, Wanless D, Von Arx A, Murphy L, Lennard N, Salzberg S, Adams MD, White O, Hall N, Stuart K, Fraser CM, El-Sayed NM.

Mol Biochem Parasitol. 2004 Apr;134(2):183-91.

PMID:
15003838
12.
14.
15.

The Trypanosoma cruzi L1Tc and NARTc non-LTR retrotransposons show relative site specificity for insertion.

Bringaud F, Bartholomeu DC, Blandin G, Delcher A, Baltz T, El-Sayed NM, Ghedin E.

Mol Biol Evol. 2006 Feb;23(2):411-20. Epub 2005 Nov 2.

PMID:
16267142
16.

Members of a large retroposon family are determinants of post-transcriptional gene expression in Leishmania.

Bringaud F, Müller M, Cerqueira GC, Smith M, Rochette A, El-Sayed NM, Papadopoulou B, Ghedin E.

PLoS Pathog. 2007 Sep 7;3(9):1291-307.

17.

Identification and analysis of ingi-related retroposons in the trypanosomatid genomes.

Bringaud F, Rogers M, Ghedin E.

Methods Mol Biol. 2015;1201:109-22. doi: 10.1007/978-1-4939-1438-8_6.

PMID:
25388110
18.

Comparative genomics of trypanosomatid parasitic protozoa.

El-Sayed NM, Myler PJ, Blandin G, Berriman M, Crabtree J, Aggarwal G, Caler E, Renauld H, Worthey EA, Hertz-Fowler C, Ghedin E, Peacock C, Bartholomeu DC, Haas BJ, Tran AN, Wortman JR, Alsmark UC, Angiuoli S, Anupama A, Badger J, Bringaud F, Cadag E, Carlton JM, Cerqueira GC, Creasy T, Delcher AL, Djikeng A, Embley TM, Hauser C, Ivens AC, Kummerfeld SK, Pereira-Leal JB, Nilsson D, Peterson J, Salzberg SL, Shallom J, Silva JC, Sundaram J, Westenberger S, White O, Melville SE, Donelson JE, Andersson B, Stuart KD, Hall N.

Science. 2005 Jul 15;309(5733):404-9.

19.

APE-type non-LTR retrotransposons of multicellular organisms encode virus-like 2A oligopeptide sequences, which mediate translational recoding during protein synthesis.

Odon V, Luke GA, Roulston C, de Felipe P, Ruan L, Escuin-Ordinas H, Brown JD, Ryan MD, Sukhodub A.

Mol Biol Evol. 2013 Aug;30(8):1955-65. doi: 10.1093/molbev/mst102. Epub 2013 May 31.

20.

Recent expansion of a new Ingi-related clade of Vingi non-LTR retrotransposons in hedgehogs.

Kojima KK, Kapitonov VV, Jurka J.

Mol Biol Evol. 2011 Jan;28(1):17-20. doi: 10.1093/molbev/msq220. Epub 2010 Aug 17.

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