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Items: 1 to 20 of 109

1.

Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare.

Caldwell KS, Russell J, Langridge P, Powell W.

Genetics. 2006 Jan;172(1):557-67. Epub 2005 Oct 11.

2.

Low levels of linkage disequilibrium in wild barley (Hordeum vulgare ssp. spontaneum) despite high rates of self-fertilization.

Morrell PL, Toleno DM, Lundy KE, Clegg MT.

Proc Natl Acad Sci U S A. 2005 Feb 15;102(7):2442-7. Epub 2005 Feb 7.

3.

Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties.

Rostoks N, Ramsay L, MacKenzie K, Cardle L, Bhat PR, Roose ML, Svensson JT, Stein N, Varshney RK, Marshall DF, Graner A, Close TJ, Waugh R.

Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18656-61. Epub 2006 Nov 3.

5.

Whole-genome association mapping in elite inbred crop varieties.

Waugh R, Marshall D, Thomas B, Comadran J, Russell J, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J, O'Sullivan D, Mackay I, Flavell A; AGOUEB; BarleyCAP, Ramsay L.

Genome. 2010 Nov;53(11):967-72. doi: 10.1139/G10-078.

PMID:
21076512
7.

Unlocking the secondary gene-pool of barley with next-generation sequencing.

Wendler N, Mascher M, Nöh C, Himmelbach A, Scholz U, Ruge-Wehling B, Stein N.

Plant Biotechnol J. 2014 Oct;12(8):1122-31. doi: 10.1111/pbi.12219. Epub 2014 Jul 6.

8.

Genetic structure and linkage disequilibrium in landrace populations of barley in Sardinia.

Rodriguez M, Rau D, O'Sullivan D, Brown AH, Papa R, Attene G.

Theor Appl Genet. 2012 Jun;125(1):171-84. doi: 10.1007/s00122-012-1824-8. Epub 2012 Mar 13.

PMID:
22411093
9.

DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits.

Haseneyer G, Stracke S, Piepho HP, Sauer S, Geiger HH, Graner A.

BMC Plant Biol. 2010 Jan 8;10:5. doi: 10.1186/1471-2229-10-5.

10.

Unraveling the genetic architecture of subtropical maize (Zea mays L.) lines to assess their utility in breeding programs.

Thirunavukkarasu N, Hossain F, Shiriga K, Mittal S, Arora K, Rathore A, Mohan S, Shah T, Sharma R, Namratha PM, Mithra AS, Mohapatra T, Gupta HS.

BMC Genomics. 2013 Dec 13;14:877. doi: 10.1186/1471-2164-14-877.

11.

Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin.

Comadran J, Thomas WT, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A, Ouabbou H, Bort J, Romagosa I, Hackett CA, Russell JR.

Theor Appl Genet. 2009 Jun;119(1):175-87. doi: 10.1007/s00122-009-1027-0. Epub 2009 May 5.

PMID:
19415228
12.

Development and Genetic Characterization of an Advanced Backcross-Nested Association Mapping (AB-NAM) Population of Wild × Cultivated Barley.

Nice LM, Steffenson BJ, Brown-Guedira GL, Akhunov ED, Liu C, Kono TJ, Morrell PL, Blake TK, Horsley RD, Smith KP, Muehlbauer GJ.

Genetics. 2016 Jul;203(3):1453-67. doi: 10.1534/genetics.116.190736. Epub 2016 May 10.

13.

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.).

Chao S, Dubcovsky J, Dvorak J, Luo MC, Baenziger SP, Matnyazov R, Clark DR, Talbert LE, Anderson JA, Dreisigacker S, Glover K, Chen J, Campbell K, Bruckner PL, Rudd JC, Haley S, Carver BF, Perry S, Sorrells ME, Akhunov ED.

BMC Genomics. 2010 Dec 29;11:727. doi: 10.1186/1471-2164-11-727.

14.

Resequencing data indicate a modest effect of domestication on diversity in barley: a cultigen with multiple origins.

Morrell PL, Gonzales AM, Meyer KK, Clegg MT.

J Hered. 2014 Mar-Apr;105(2):253-64. doi: 10.1093/jhered/est083. Epub 2013 Dec 11.

PMID:
24336926
15.

Genome-wide linkage disequilibrium and genetic diversity in five populations of Australian domestic sheep.

Al-Mamun HA, Clark SA, Kwan P, Gondro C.

Genet Sel Evol. 2015 Nov 24;47:90. doi: 10.1186/s12711-015-0169-6.

16.

The extent of linkage disequilibrium in Arabidopsis thaliana.

Nordborg M, Borevitz JO, Bergelson J, Berry CC, Chory J, Hagenblad J, Kreitman M, Maloof JN, Noyes T, Oefner PJ, Stahl EA, Weigel D.

Nat Genet. 2002 Feb;30(2):190-3. Epub 2002 Jan 7.

PMID:
11780140
17.

Nitrogen-metabolism related genes in barley - haplotype diversity, linkage mapping and associations with malting and kernel quality parameters.

Matthies IE, Weise S, Förster J, Korzun V, Stein N, Röder MS.

BMC Genet. 2013 Sep 4;14:77. doi: 10.1186/1471-2156-14-77.

18.

Population structure and linkage disequilibrium in barley assessed by DArT markers.

Zhang LY, Marchand S, Tinker NA, Belzile F.

Theor Appl Genet. 2009 Jun;119(1):43-52. doi: 10.1007/s00122-009-1015-4. Epub 2009 Apr 3.

PMID:
19343317
19.

Effects of introgression and recombination on haplotype structure and linkage disequilibrium surrounding a locus encoding Bymovirus resistance in barley.

Stracke S, Presterl T, Stein N, Perovic D, Ordon F, Graner A.

Genetics. 2007 Feb;175(2):805-17. Epub 2006 Dec 6.

20.

Expression genetics and haplotype analysis reveal cis regulation of serine carboxypeptidase I (Cxp1), a candidate gene for malting quality in barley (Hordeum vulgare L.).

Potokina E, Prasad M, Malysheva L, Röder MS, Graner A.

Funct Integr Genomics. 2006 Jan;6(1):25-35. Epub 2005 Nov 10.

PMID:
16283224

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