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Items: 1 to 20 of 483

1.

Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: an archaeal homologue of human nuclear ribonuclease P protein Rpp21.

Kakuta Y, Ishimatsu I, Numata T, Kimura K, Yao M, Tanaka I, Kimura M.

Biochemistry. 2005 Sep 13;44(36):12086-93.

PMID:
16142906
2.

Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Takagi H, Watanabe M, Kakuta Y, Kamachi R, Numata T, Tanaka I, Kimura M.

Biochem Biophys Res Commun. 2004 Jul 2;319(3):787-94.

PMID:
15184052
3.

A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3.

Fukuhara H, Kifusa M, Watanabe M, Terada A, Honda T, Numata T, Kakuta Y, Kimura M.

Biochem Biophys Res Commun. 2006 May 12;343(3):956-64. Epub 2006 Mar 15.

PMID:
16574071
4.

Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme.

Kawano S, Nakashima T, Kakuta Y, Tanaka I, Kimura M.

J Mol Biol. 2006 Mar 24;357(2):583-91. Epub 2006 Jan 11.

PMID:
16430919
6.

Protein-protein interactions in the subunits of ribonuclease P in the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Kifusa M, Fukuhara H, Hayashi T, Kimura M.

Biosci Biotechnol Biochem. 2005 Jun;69(6):1209-12.

7.

Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Hada K, Nakashima T, Osawa T, Shimada H, Kakuta Y, Kimura M.

Biosci Biotechnol Biochem. 2008 Mar;72(3):749-58. Epub 2008 Mar 7.

8.

Structure of an archaeal homolog of the human protein complex Rpp21-Rpp29 that is a key core component for the assembly of active ribonuclease P.

Honda T, Kakuta Y, Kimura K, Saho J, Kimura M.

J Mol Biol. 2008 Dec 19;384(3):652-62. doi: 10.1016/j.jmb.2008.09.056. Epub 2008 Oct 2.

PMID:
18929577
10.

Extra-structural elements in the RNA recognition motif in archaeal Pop5 play a crucial role in the activation of RNase P RNA from Pyrococcus horikoshii OT3.

Hazeyama K, Ishihara M, Ueda T, Nishimoto E, Nakashima T, Kakuta Y, Kimura M.

Biochem Biophys Res Commun. 2013 Nov 1;440(4):594-8. doi: 10.1016/j.bbrc.2013.09.140. Epub 2013 Oct 10.

PMID:
24120499
11.

Crystal structure of the ATPPase subunit and its substrate-dependent association with the GATase subunit: a novel regulatory mechanism for a two-subunit-type GMP synthetase from Pyrococcus horikoshii OT3.

Maruoka S, Horita S, Lee WC, Nagata K, Tanokura M.

J Mol Biol. 2010 Jan 15;395(2):417-29. doi: 10.1016/j.jmb.2009.10.053. Epub 2009 Nov 10.

PMID:
19900465
12.

Reconstitution of archaeal ribonuclease P from RNA and four protein components.

Kouzuma Y, Mizoguchi M, Takagi H, Fukuhara H, Tsukamoto M, Numata T, Kimura M.

Biochem Biophys Res Commun. 2003 Jul 4;306(3):666-73.

PMID:
12810070
13.

Structural modeling of RNase P RNA of the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Zwieb C, Nakao Y, Nakashima T, Takagi H, Goda S, Andersen ES, Kakuta Y, Kimura M.

Biochem Biophys Res Commun. 2011 Oct 28;414(3):517-22. doi: 10.1016/j.bbrc.2011.09.098. Epub 2011 Sep 24.

PMID:
21968019
14.

Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3.

Terada A, Honda T, Fukuhara H, Hada K, Kimura M.

J Biochem. 2006 Aug;140(2):293-8. Epub 2006 Jul 7.

PMID:
16829535
15.

Structure of archaeal glyoxylate reductase from Pyrococcus horikoshii OT3 complexed with nicotinamide adenine dinucleotide phosphate.

Yoshikawa S, Arai R, Kinoshita Y, Uchikubo-Kamo T, Wakamatsu T, Akasaka R, Masui R, Terada T, Kuramitsu S, Shirouzu M, Yokoyama S.

Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):357-65. Epub 2007 Feb 21.

PMID:
17327673
16.

Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution.

Ishijima J, Uchida Y, Kuroishi C, Tuzuki C, Takahashi N, Okazaki N, Yutani K, Miyano M.

Proteins. 2006 Mar 1;62(4):1133-7. No abstract available.

PMID:
16374837
17.
18.

Structure of the AlaX-M trans-editing enzyme from Pyrococcus horikoshii.

Fukunaga R, Yokoyama S.

Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):390-400. Epub 2007 Feb 21.

PMID:
17327676
19.

Crystal structure of archaeal toxin-antitoxin RelE-RelB complex with implications for toxin activity and antitoxin effects.

Takagi H, Kakuta Y, Okada T, Yao M, Tanaka I, Kimura M.

Nat Struct Mol Biol. 2005 Apr;12(4):327-31. Epub 2005 Mar 13.

PMID:
15768033
20.

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