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Items: 1 to 20 of 154

2.

Relationships of gag-pol diversity between Ty3/Gypsy and Retroviridae LTR retroelements and the three kings hypothesis.

Llorens C, Fares MA, Moya A.

BMC Evol Biol. 2008 Oct 8;8:276. doi: 10.1186/1471-2148-8-276.

3.

Automated recognition of retroviral sequences in genomic data--RetroTector.

Sperber GO, Airola T, Jern P, Blomberg J.

Nucleic Acids Res. 2007;35(15):4964-76. Epub 2007 Jul 17.

4.

A novel recombinant retrovirus in the genomes of modern birds combines features of avian and mammalian retroviruses.

Henzy JE, Gifford RJ, Johnson WE, Coffin JM.

J Virol. 2014 Mar;88(5):2398-405. doi: 10.1128/JVI.02863-13. Epub 2013 Dec 18.

5.

Characterization of the bovine endogenous retrovirus beta3 genome.

Xiao R, Kim J, Choi H, Park K, Lee H, Park C.

Mol Cells. 2008 Feb 29;25(1):142-7.

6.

RetroTector online, a rational tool for analysis of retroviral elements in small and medium size vertebrate genomic sequences.

Sperber G, Lövgren A, Eriksson NE, Benachenhou F, Blomberg J.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S4. doi: 10.1186/1471-2105-10-S6-S4.

7.

Evolution and distribution of class II-related endogenous retroviruses.

Gifford R, Kabat P, Martin J, Lynch C, Tristem M.

J Virol. 2005 May;79(10):6478-86.

8.

Genome-wide detection and characterization of endogenous retroviruses in Bos taurus.

Garcia-Etxebarria K, Jugo BM.

J Virol. 2010 Oct;84(20):10852-62. doi: 10.1128/JVI.00106-10. Epub 2010 Aug 4.

9.

Risks linked to endogenous retroviruses for vaccine production: a general overview.

Dewannieux M, Ribet D, Heidmann T.

Biologicals. 2010 May;38(3):366-70. doi: 10.1016/j.biologicals.2010.01.006. Epub 2010 Mar 23. Review.

PMID:
20335054
10.

Pan-vertebrate comparative genomics unmasks retrovirus macroevolution.

Hayward A, Cornwallis CK, Jern P.

Proc Natl Acad Sci U S A. 2015 Jan 13;112(2):464-9. doi: 10.1073/pnas.1414980112. Epub 2014 Dec 22.

11.

S71 is a phylogenetically distinct human endogenous retroviral element with structural and sequence homology to simian sarcoma virus (SSV).

Werner T, Brack-Werner R, Leib-Mösch C, Backhaus H, Erfle V, Hehlmann R.

Virology. 1990 Jan;174(1):225-38.

PMID:
2152993
12.

Classification and nomenclature of endogenous retroviral sequences (ERVs): problems and recommendations.

Blomberg J, Benachenhou F, Blikstad V, Sperber G, Mayer J.

Gene. 2009 Dec 15;448(2):115-23. doi: 10.1016/j.gene.2009.06.007. Epub 2009 Jun 18. Review.

PMID:
19540319
13.

Evolutionary conservation of orthoretroviral long terminal repeats (LTRs) and ab initio detection of single LTRs in genomic data.

Benachenhou F, Jern P, Oja M, Sperber G, Blikstad V, Somervuo P, Kaski S, Blomberg J.

PLoS One. 2009;4(4):e5179. doi: 10.1371/journal.pone.0005179. Epub 2009 Apr 13.

14.

Identification and characterization of diverse groups of endogenous retroviruses in felids.

Mata H, Gongora J, Eizirik E, Alves BM, Soares MA, Ravazzolo AP.

Retrovirology. 2015 Mar 15;12:26. doi: 10.1186/s12977-015-0152-x.

15.

Identification and classification of feline endogenous retroviruses in the cat genome using degenerate PCR and in silico data analysis.

Song N, Jo H, Choi M, Kim JH, Seo HG, Cha SY, Seo K, Park C.

J Gen Virol. 2013 Jul;94(Pt 7):1587-96. doi: 10.1099/vir.0.051862-0. Epub 2013 Mar 20.

PMID:
23515024
16.

Improved integration time estimation of endogenous retroviruses with phylogenetic data.

Martins H, Villesen P.

PLoS One. 2011 Mar 4;6(3):e14745. doi: 10.1371/journal.pone.0014745.

17.

The phylogeny of orthoretroviral long terminal repeats (LTRs).

Benachenhou F, Blikstad V, Blomberg J.

Gene. 2009 Dec 15;448(2):134-8. doi: 10.1016/j.gene.2009.07.002. Epub 2009 Jul 9.

PMID:
19595747
18.

Evolution and phylogeny of insect endogenous retroviruses.

Terzian C, Pélisson A, Bucheton A.

BMC Evol Biol. 2001;1:3. Epub 2001 Aug 10.

19.

Evolutionary history of bovine endogenous retroviruses in the Bovidae family.

Garcia-Etxebarria K, Jugo BM.

BMC Evol Biol. 2013 Nov 20;13:256. doi: 10.1186/1471-2148-13-256.

20.

Structural characterization of the genome of BERV gamma4, the most abundant endogenous retrovirus family in cattle.

Xiao R, Park K, Oh Y, Kim J, Park C.

Mol Cells. 2008 Oct 31;26(4):404-8. Epub 2008 Jul 7.

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