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Items: 1 to 20 of 107

1.

Munich information center for protein sequences plant genome resources: a framework for integrative and comparative analyses 1(W).

Schoof H, Spannagl M, Yang L, Ernst R, Gundlach H, Haase D, Haberer G, Mayer KF.

Plant Physiol. 2005 Jul;138(3):1301-9.

2.

MIPS plant genome information resources.

Spannagl M, Haberer G, Ernst R, Schoof H, Mayer KF.

Methods Mol Biol. 2007;406:137-59.

PMID:
18287691
3.

Plant Omics Data Center: an integrated web repository for interspecies gene expression networks with NLP-based curation.

Ohyanagi H, Takano T, Terashima S, Kobayashi M, Kanno M, Morimoto K, Kanegae H, Sasaki Y, Saito M, Asano S, Ozaki S, Kudo T, Yokoyama K, Aya K, Suwabe K, Suzuki G, Aoki K, Kubo Y, Watanabe M, Matsuoka M, Yano K.

Plant Cell Physiol. 2015 Jan;56(1):e9. doi: 10.1093/pcp/pcu188. Epub 2014 Dec 11.

4.

MIPS PlantsDB: a database framework for comparative plant genome research.

Nussbaumer T, Martis MM, Roessner SK, Pfeifer M, Bader KC, Sharma S, Gundlach H, Spannagl M.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1144-51. doi: 10.1093/nar/gks1153. Epub 2012 Nov 29.

5.

MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics.

Schoof H, Ernst R, Nazarov V, Pfeifer L, Mewes HW, Mayer KF.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D373-6.

6.

CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.

Chen X, Laudeman TW, Rushton PJ, Spraggins TA, Timko MP.

BMC Bioinformatics. 2007 Apr 19;8:129.

7.

MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource based on the first complete plant genome.

Schoof H, Zaccaria P, Gundlach H, Lemcke K, Rudd S, Kolesov G, Arnold R, Mewes HW, Mayer KF.

Nucleic Acids Res. 2002 Jan 1;30(1):91-3.

8.

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists.

Yuan Q, Ouyang S, Liu J, Suh B, Cheung F, Sultana R, Lee D, Quackenbush J, Buell CR.

Nucleic Acids Res. 2003 Jan 1;31(1):229-33.

9.

PMRD: plant microRNA database.

Zhang Z, Yu J, Li D, Zhang Z, Liu F, Zhou X, Wang T, Ling Y, Su Z.

Nucleic Acids Res. 2010 Jan;38(Database issue):D806-13. doi: 10.1093/nar/gkp818. Epub 2009 Oct 6.

10.

The Rice Genome Knowledgebase (RGKbase): an annotation database for rice comparative genomics and evolutionary biology.

Wang D, Xia Y, Li X, Hou L, Yu J.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1199-205. doi: 10.1093/nar/gks1225. Epub 2012 Nov 28.

11.

MIPS: curated databases and comprehensive secondary data resources in 2010.

Mewes HW, Ruepp A, Theis F, Rattei T, Walter M, Frishman D, Suhre K, Spannagl M, Mayer KF, Stümpflen V, Antonov A.

Nucleic Acids Res. 2011 Jan;39(Database issue):D220-4. doi: 10.1093/nar/gkq1157. Epub 2010 Nov 24.

12.

BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics.

Zhao W, Wang J, He X, Huang X, Jiao Y, Dai M, Wei S, Fu J, Chen Y, Ren X, Zhang Y, Ni P, Zhang J, Li S, Wang J, Wong GK, Zhao H, Yu J, Yang H, Wang J.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D377-82.

13.

Rice at the forefront of plant genome informatics.

Antonio BA, Sakata K, Sasaki T.

Genome Inform Ser Workshop Genome Inform. 2000;11:3-11.

PMID:
11700582
14.

MTGD: The Medicago truncatula genome database.

Krishnakumar V, Kim M, Rosen BD, Karamycheva S, Bidwell SL, Tang H, Town CD.

Plant Cell Physiol. 2015 Jan;56(1):e1. doi: 10.1093/pcp/pcu179. Epub 2014 Nov 28.

PMID:
25432968
15.

Legume Resources: MtDB and Medicago.Org.

Retzel EF, Johnson JE, Crow JA, Lamblin AF, Paule CE.

Methods Mol Biol. 2007;406:261-74.

PMID:
18287697
16.

BGI-RIS V2.

He X, Wang J.

Methods Mol Biol. 2007;406:275-99.

PMID:
18287698
17.

MIPSPlantsDB--plant database resource for integrative and comparative plant genome research.

Spannagl M, Noubibou O, Haase D, Yang L, Gundlach H, Hindemitt T, Klee K, Haberer G, Schoof H, Mayer KF.

Nucleic Acids Res. 2007 Jan;35(Database issue):D834-40.

18.

Plant database resources at The Institute for Genomic Research.

Chan AP, Rabinowicz PD, Quackenbush J, Buell CR, Town CD.

Methods Mol Biol. 2007;406:113-36.

PMID:
18287690
19.

RiceGAAS: an automated annotation system and database for rice genome sequence.

Sakata K, Nagamura Y, Numa H, Antonio BA, Nagasaki H, Idonuma A, Watanabe W, Shimizu Y, Horiuchi I, Matsumoto T, Sasaki T, Higo K.

Nucleic Acids Res. 2002 Jan 1;30(1):98-102.

20.

Databases and information integration for the Medicago truncatula genome and transcriptome.

Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, Town CD, Young ND, Retzel EF.

Plant Physiol. 2005 May;138(1):38-46.

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